RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 STK11IPQ8N1F8 1099 aa16.86■□□□□ 0.29
NOP56-220ENST00000616692 ANKRD2Q9GZV1 360 aa16.86■□□□□ 0.29
NOP56-220ENST00000616692 C6orf203Q9P0P8 240 aaPredicted RBP16.86■□□□□ 0.29
NOP56-220ENST00000616692 WDHD1O75717 1129 aaPredicted RBP16.85■□□□□ 0.29
NOP56-220ENST00000616692 LBRQ14739 615 aaKnown RBP16.85■□□□□ 0.29
NOP56-220ENST00000616692 INAQ16352 499 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 BPHLQ86WA6 291 aaPredicted RBP16.85■□□□□ 0.29
NOP56-220ENST00000616692 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.85■□□□□ 0.293e-14■■■■■ 49.8
NOP56-220ENST00000616692 IL17RAQ96F46 866 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 MPP4Q96JB8 637 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 FAM167BQ9BTA0 163 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 PUS3Q9BZE2 481 aaKnown RBP16.85■□□□□ 0.29
NOP56-220ENST00000616692 MRPL46Q9H2W6 279 aaKnown RBP16.85■□□□□ 0.29
NOP56-220ENST00000616692 BAIAP2L1Q9UHR4 511 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 KIF5BP33176 963 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 GUCY2FP51841 1108 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 VSNL1P62760 191 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 SREBF2Q12772 1141 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 AGAP9Q5VTM2 703 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 CEP128Q6ZU80 1094 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 SH3GL2Q99962 352 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 BPIFA3Q9BQP9 254 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 INIPQ9NRY2 104 aa16.85■□□□□ 0.29
NOP56-220ENST00000616692 UPP2O95045 317 aa16.84■□□□□ 0.29
NOP56-220ENST00000616692 CFAP157Q5JU67 520 aa16.84■□□□□ 0.29
NOP56-220ENST00000616692 DACT2Q5SW24 774 aa16.84■□□□□ 0.29
NOP56-220ENST00000616692 APOBEC3FQ8IUX4 373 aaKnown RBP16.84■□□□□ 0.29
NOP56-220ENST00000616692 DNAJC25Q9H1X3 360 aa16.84■□□□□ 0.29
NOP56-220ENST00000616692 VCX3BQ9H321 246 aa16.84■□□□□ 0.29
NOP56-220ENST00000616692 SFPQP23246 707 aaKnown RBP eCLIP16.84■□□□□ 0.29
NOP56-220ENST00000616692 STAT6P42226 847 aa16.84■□□□□ 0.29
NOP56-220ENST00000616692 SGSM1Q2NKQ1 1148 aa16.84■□□□□ 0.29
NOP56-220ENST00000616692 ATP6V0A1Q93050 837 aa16.84■□□□□ 0.29
NOP56-220ENST00000616692 HPCAL4Q9UM19 191 aa16.84■□□□□ 0.29
NOP56-220ENST00000616692 LAMB1P07942 1786 aa16.84■□□□□ 0.29
NOP56-220ENST00000616692 MYH3P11055 1940 aa16.84■□□□□ 0.29
NOP56-220ENST00000616692 TBKBP1A7MCY6 615 aa16.83■□□□□ 0.29
NOP56-220ENST00000616692 SCG2P13521 617 aa16.83■□□□□ 0.29
NOP56-220ENST00000616692 ADAM9Q13443 819 aa16.83■□□□□ 0.29
NOP56-220ENST00000616692 NAA35Q5VZE5 725 aa16.83■□□□□ 0.29
NOP56-220ENST00000616692 FAM117BQ6P1L5 589 aa16.83■□□□□ 0.29
NOP56-220ENST00000616692 C15orf52Q6ZUT6 534 aaKnown RBP16.83■□□□□ 0.29
NOP56-220ENST00000616692 KRI1Q8N9T8 703 aaKnown RBP16.83■□□□□ 0.29
NOP56-220ENST00000616692 TTLL11Q8NHH1 800 aa16.83■□□□□ 0.29
NOP56-220ENST00000616692 PHAXQ9H814 394 aaKnown RBP16.83■□□□□ 0.29
NOP56-220ENST00000616692 DKK3Q9UBP4 350 aa16.83■□□□□ 0.29
NOP56-220ENST00000616692 ATP6V1DQ9Y5K8 247 aa16.83■□□□□ 0.29
NOP56-220ENST00000616692 PPP2R3BQ9Y5P8 575 aa16.83■□□□□ 0.29
NOP56-220ENST00000616692 ALDH1A1P00352 501 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 PMS2P54278 862 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 MRPS35P82673 323 aaKnown RBP16.83■□□□□ 0.28
NOP56-220ENST00000616692 MAP7Q14244 749 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 CNGA3Q16281 694 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 PALB2Q86YC2 1186 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 KIAA1468Q9P260 1216 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 MINPP1Q9UNW1 487 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 DIAPH2O60879 1101 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 LGR5O75473 907 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 USP46P62068 366 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 FKBP1AP62942 108 aaKnown RBP16.83■□□□□ 0.28
NOP56-220ENST00000616692 ELF3P78545 371 aaPredicted RBP16.83■□□□□ 0.28
NOP56-220ENST00000616692 RBM43Q6ZSC3 357 aaKnown RBP16.83■□□□□ 0.28
NOP56-220ENST00000616692 CKAP2LQ8IYA6 745 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 ARHGAP18Q8N392 663 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 ZBED3Q96IU2 234 aaPredicted RBP16.83■□□□□ 0.28
NOP56-220ENST00000616692 SRPK1Q96SB4 655 aaKnown RBP16.83■□□□□ 0.28
NOP56-220ENST00000616692 AASDHPPTQ9NRN7 309 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 LNPEPQ9UIQ6 1025 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 HDAC9Q9UKV0 1011 aa16.83■□□□□ 0.28
NOP56-220ENST00000616692 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.82■□□□□ 0.28
NOP56-220ENST00000616692 ZSCAN22P10073 491 aaPredicted RBP16.82■□□□□ 0.28
NOP56-220ENST00000616692 NFKBIAP25963 317 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 FOSBP53539 338 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 CAMK4Q16566 473 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 ME3Q16798 604 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 PRPF38BQ5VTL8 546 aaKnown RBP16.82■□□□□ 0.28
NOP56-220ENST00000616692 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 C6orf89Q6UWU4 347 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 MTMR14Q8NCE2 650 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 DHX58Q96C10 678 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 TRAPPC9Q96Q05 1148 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 GOLPH3LQ9H4A5 285 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 COMMD8Q9NX08 183 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 DAAM1Q9Y4D1 1078 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 TMEM110-MUSTN1A8MSY1 372 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 HNRNPCP07910 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
NOP56-220ENST00000616692 CCDC159P0C7I6 412 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 CCT4P50991 539 aaKnown RBP16.82■□□□□ 0.28
NOP56-220ENST00000616692 RIPK1Q13546 671 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 COBLL1Q53SF7 1204 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 SLC2A7Q6PXP3 512 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 DLK2Q6UY11 383 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 NSUN7Q8NE18 718 aaKnown RBP16.82■□□□□ 0.28
NOP56-220ENST00000616692 KIFAP3Q92845 792 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 SPATA32Q96LK8 384 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 C2orf49Q9BVC5 232 aaPredicted RBP16.82■□□□□ 0.28
NOP56-220ENST00000616692 SUCLA2Q9P2R7 463 aaPredicted RBP16.82■□□□□ 0.28
NOP56-220ENST00000616692 CEP131Q9UPN4 1083 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 COMMD10Q9Y6G5 202 aa16.82■□□□□ 0.28
NOP56-220ENST00000616692 MYPNQ86TC9 1320 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms