RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 BIRC3Q13489 604 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 NAA35Q5VZE5 725 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 KCTD16Q68DU8 428 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 SFR1Q86XK3 245 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 SP8Q8IXZ3 490 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 COG1Q8WTW3 980 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 BICD1Q96G01 975 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 MXD3Q9BW11 206 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 STIM2Q9P246 746 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 TACC3Q9Y6A5 838 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 GCOM1H8Y6P7 765 aaPredicted RBP6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 POLR2MP0CAP2 368 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 GYS1P13807 737 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 SMARCA1P28370 1054 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 EMBQ6PCB8 327 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 CCDC26Q8TAB7 109 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 PIGOQ8TEQ8 1089 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 WDR11Q9BZH6 1224 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 MLXIPQ9HAP2 919 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 BZW2Q9Y6E2 419 aaKnown RBP6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 SSU72P8A0A1W2PR75 194 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 SFI1A8K8P3 1242 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 ATP1A1P05023 1023 aaKnown RBP6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 USP14P54578 494 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 PPM1KQ8N3J5 372 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 ANKS1AQ92625 1134 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 RASSF4Q9H2L5 321 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 EPB41L5Q9HCM4 733 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 MRPL11Q9Y3B7 192 aaKnown RBP6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 C3P01024 1663 aa6.18□□□□□ -1.42
SYNCRIP-204ENST00000616122 CALUO43852 315 aaPredicted RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 RNF40O75150 1001 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 CRKP46108 304 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 FIGNQ5HY92 759 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 RUFY4Q6ZNE9 571 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 ADGRF4Q8IZF3 695 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 MKRN1Q9UHC7 482 aaKnown RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 DUSP10Q9Y6W6 482 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 TNS2Q63HR2 1409 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 RNF225M0QZC1 329 aaPredicted RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 RGL2O15211 777 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 PLA2G4AP47712 749 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 PLCB3Q01970 1234 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 LLGL1Q15334 1064 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 TMEM139Q8IV31 216 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 RTFDC1Q9BY42 306 aaPredicted RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 GVINP1Q7Z2Y8 2422 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 A6NNZ2 444 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 MOCS3O95396 460 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 NEFHP12036 1026 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 MYCLP12524 364 aaPredicted RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 HOXA10P31260 410 aaPredicted RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 SMTNP53814 917 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 COASYQ13057 564 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 TUBB8Q3ZCM7 444 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 DAGLBQ8NCG7 672 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 NACC1Q96RE7 527 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 IWS1Q96ST2 819 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 NUDT12Q9BQG2 462 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 RIOX1Q9H6W3 641 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 RGL1Q9NZL6 768 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 MTUS1Q9ULD2 1270 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 SNX12Q9UMY4 172 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 SUGT1Q9Y2Z0 365 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 PCDHA13Q9Y5I0 950 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 FHOD1Q9Y613 1164 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 NRXN3Q9Y4C0 1643 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 ANKRD65E5RJM6 399 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 KRIT1O00522 736 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 LRRN2O75325 713 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 ATP1A2P50993 1020 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 USP11P51784 963 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 PMS1P54277 932 aaKnown RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 RHBDL3P58872 404 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 BEND6Q5SZJ8 279 aaPredicted RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 CEP85LQ5SZL2 805 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 PPP4R4Q6NUP7 873 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 CCDC155Q8N6L0 562 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 OTUD6BQ8N6M0 293 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 RAD54LQ92698 747 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 NAP1L3Q99457 506 aaPredicted RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 PARVGQ9HBI0 331 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 NYAP2Q9P242 653 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 MTRF1LQ9UGC7 380 aaKnown RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 MYO5BQ9ULV0 1848 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 FGRP09769 529 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 GRIPAP1Q4V328 841 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 CPLX4Q7Z7G2 160 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 CCDC25Q86WR0 208 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 IMPG2Q9BZV3 1241 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 POLLQ9UGP5 575 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 AMFRQ9UKV5 643 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 AFF2P51816 1311 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 AFPP02771 609 aaKnown RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 BCRP11274 1271 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 HOXA7P31268 230 aaPredicted RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 CEP55Q53EZ4 464 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 NFRKBQ6P4R8 1299 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 MIER3Q7Z3K6 550 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms