RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 GABPAQ06546 454 aa9.93□□□□□ -0.82
SPTBN1-207ENST00000615901 TCP11X2Q5H9J9 407 aa9.93□□□□□ -0.82
SPTBN1-207ENST00000615901 SGMS1Q86VZ5 419 aa9.93□□□□□ -0.82
SPTBN1-207ENST00000615901 ZNF609O15014 1411 aa9.93□□□□□ -0.82
SPTBN1-207ENST00000615901 ARHGEF37A1IGU5 675 aa9.93□□□□□ -0.82
SPTBN1-207ENST00000615901 MMP10P09238 476 aa9.93□□□□□ -0.82
SPTBN1-207ENST00000615901 RASSF7Q02833 373 aa9.93□□□□□ -0.82
SPTBN1-207ENST00000615901 CLEC17AQ6ZS10 378 aa9.93□□□□□ -0.82
SPTBN1-207ENST00000615901 JRKLQ9Y4A0 524 aa9.93□□□□□ -0.82
SPTBN1-207ENST00000615901 PCDHB4Q9Y5E5 795 aa9.93□□□□□ -0.82
SPTBN1-207ENST00000615901 NOL3O60936 208 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 PPP4R1Q8TF05 950 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 FAM167AQ96KS9 214 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 CLRN2A0PK11 232 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 SERPING1P05155 500 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 STX2P32856 288 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 GUCY2FP51841 1108 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 EPHB4P54760 987 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 SLC12A2P55011 1212 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 TTC16Q8NEE8 873 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 CCDC127Q96BQ5 260 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 MMS19Q96T76 1030 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 FTOQ9C0B1 505 aaKnown RBP eCLIP9.92□□□□□ -0.824e-7■■■□□ 18.2
SPTBN1-207ENST00000615901 VCXQ9H320 206 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 NCOA3Q9Y6Q9 1424 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 MYO18AQ92614 2054 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 UNC13DQ70J99 1090 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 PODNQ7Z5L7 613 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 ENAHQ8N8S7 591 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 PBKQ96KB5 322 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 DCP1AQ9NPI6 582 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 ABCB11O95342 1321 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 SLC26A4O43511 780 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 EHHADHQ08426 723 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 CIAPIN1Q6FI81 312 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 SPZ1Q9BXG8 430 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 BCAP29Q9UHQ4 241 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 MYO1EQ12965 1108 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 NEDD9Q14511 834 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 KMT5BQ4FZB7 885 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 GAS2L3Q86XJ1 694 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 JCADQ9P266 1359 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 CACNA1FO60840 1977 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 SLC16A2P36021 539 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 SLFN12LQ6IEE8 588 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 PLEKHA8P1O95397 391 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 GTF2A1P52655 376 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 A6NJR5 290 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 USP17L5A8MUK1 530 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 KRT31Q15323 416 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 GKAP1Q5VSY0 366 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 USP17L2Q6R6M4 530 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 ATP6V0A4Q9HBG4 840 aa9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 KDM6AO15550 1401 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-207ENST00000615901 PFDN6O15212 129 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 MFAP3LO75121 409 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 TROVE2P10155 538 aaKnown RBP eCLIP9.91□□□□□ -0.822e-11■□□□□ 10.1
SPTBN1-207ENST00000615901 EMILIN3Q9NT22 766 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 PTPREP23469 700 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 FOXO4P98177 505 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 ARHGEF6Q15052 776 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 PALM2Q8IXS6 379 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 IFNB1P01574 187 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 RFX1P22670 979 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 ARMC9Q7Z3E5 817 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 DPP9Q86TI2 863 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 FBXO40Q9UH90 709 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 UBN2Q6ZU65 1347 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 CAPN9O14815 690 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 ECE2O60344 883 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 RNF8O76064 485 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 BFSP1Q12934 665 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 SRGAP2BP0DMP2 458 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 CRKP46108 304 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 MXI1P50539 228 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 SMYD4Q8IYR2 804 aaPredicted RBP9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 GRAMD1CQ8IYS0 662 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 PYCARDQ9ULZ3 195 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 MYO1FO00160 1098 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 SEPT14Q6ZU15 432 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 CCDC13Q8IYE1 715 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 CABS1Q96KC9 395 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 ZNF341Q9BYN7 854 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 GPR162Q16538 588 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 ZNF653Q96CK0 615 aa9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 RAB3IPQ96QF0 476 aaPredicted RBP9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 NHEJ1Q9H9Q4 299 aaPredicted RBP9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 MRPL47Q9HD33 250 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-207ENST00000615901 NWD1Q149M9 1564 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 MAP3K21Q5TCX8 1036 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 GPIHBP1Q8IV16 184 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 CEP170P1Q96L14 293 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 CFAP57Q96MR6 1250 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 DDX23Q9BUQ8 820 aaKnown RBP9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 IPO11Q9UI26 975 aaKnown RBP9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 TMEM47Q9BQJ4 181 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 NDST4Q9H3R1 872 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 GOLGA8CPA6NN73 597 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 TBC1D9BQ66K14 1250 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 NEK9Q8TD19 979 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms