RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 COPS5Q92905 334 aa4.09□□□□□ -1.75
HMGB1P24-202ENST00000615653 MRGPRX3Q96LB0 322 aa4.09□□□□□ -1.75
HMGB1P24-202ENST00000615653 MMP19Q99542 508 aa4.09□□□□□ -1.75
HMGB1P24-202ENST00000615653 MCMBPQ9BTE3 642 aa4.09□□□□□ -1.75
HMGB1P24-202ENST00000615653 TMEM168Q9H0V1 697 aa4.09□□□□□ -1.75
HMGB1P24-202ENST00000615653 IGSF5Q9NSI5 407 aa4.09□□□□□ -1.75
HMGB1P24-202ENST00000615653 FBLN5Q9UBX5 448 aa4.09□□□□□ -1.75
HMGB1P24-202ENST00000615653 R3HCC1Q9Y3T6 440 aaKnown RBP4.09□□□□□ -1.75
HMGB1P24-202ENST00000615653 NPHP3-ACAD11A0A0J9YXS1 232 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 FOXS1O43638 330 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 SUSD5O60279 629 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 SCRN1Q12765 414 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 PRAMEF18Q5VWM3 479 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 E4F1Q66K89 784 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 GTF2IRD2BQ6EKJ0 949 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 IQCEQ6IPM2 695 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 EEPD1Q7L9B9 569 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 GTF2IRD2Q86UP8 949 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 MIB1Q86YT6 1006 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 FAM26EQ8N5C1 309 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 ZNF428Q96B54 188 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 NKX2-4Q9H2Z4 354 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 ZNF408Q9H9D4 720 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 CYP26B1Q9NR63 512 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 MRVI1Q9Y6F6 885 aa4.08□□□□□ -1.76
HMGB1P24-202ENST00000615653 AGRPO00253 132 aa4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 DDAH1O94760 285 aa4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 DNAJA1P31689 397 aaKnown RBP4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 IL13P35225 146 aa4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 ETFBP38117 255 aa4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 KCNAB2Q13303 367 aa4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 ACBD5Q5T8D3 534 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 TCTN3Q6NUS6 607 aa4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 CD300LDQ6UXZ3 194 aa4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 ZNF227Q86WZ6 799 aa4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 DCP2Q8IU60 420 aaKnown RBP4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 CCDC140Q96MF4 163 aa4.07□□□□□ -1.76
HMGB1P24-202ENST00000615653 B2RBV5 119 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 CPP00450 1065 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 SCG5P05408 212 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 THBDP07204 575 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 ADH4P08319 380 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 PLS3P13797 630 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 HOXC12P31275 282 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 GTF2A2P52657 109 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 COL10A1Q03692 680 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 ADAM9Q13443 819 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 TESK1Q15569 626 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 SV2CQ496J9 727 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 FNDC7Q5VTL7 733 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 WWC2Q6AWC2 1192 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 KLHL36Q8N4N3 616 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 PPP1R14AQ96A00 147 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 MTA3Q9BTC8 594 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 L2HGDHQ9H9P8 463 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 SEC61A2Q9H9S3 476 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 LRP2BPQ9P2M1 347 aa4.06□□□□□ -1.76
HMGB1P24-202ENST00000615653 C7orf72A4D263 438 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 C1SP09871 688 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 MRPS21P82921 87 aaKnown RBP4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 DDR2Q16832 855 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 SLC10A6Q3KNW5 377 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 AGBL4Q5VU57 503 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 MRM1Q6IN84 353 aaKnown RBP4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 ZNF627Q7L945 461 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 ZC3H18Q86VM9 953 aaKnown RBP4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 CPNE8Q86YQ8 564 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 NPLOC4Q8TAT6 608 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 CACTINQ8WUQ7 758 aaKnown RBP4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 BTN2A2Q8WVV5 523 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 GNRHR2Q96P88 292 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 CLEC1BQ9P126 229 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 GULP1Q9UBP9 304 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 RWDD3Q9Y3V2 267 aa4.05□□□□□ -1.76
HMGB1P24-202ENST00000615653 IQCA1LA6NCM1 817 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 MEFVO15553 781 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 MYO1BO43795 1136 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 PPP1R11O60927 126 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 GJB6O95452 261 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 CNOT4O95628 575 aaKnown RBP4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 ITGAVP06756 1048 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 SNRPB2P08579 225 aaKnown RBP4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 SLC6A11P48066 632 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 RPL11P62913 178 aaKnown RBP4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 MROH9Q5TGP6 573 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 ANKS3Q6ZW76 656 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 RIOX2Q8IUF8 465 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 Q8N1Y9 231 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 FRS2Q8WU20 508 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 HNRNPLLQ8WVV9 542 aaKnown RBP4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 DIO2Q92813 273 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 ZNF669Q96BR6 464 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 SGSM3Q96HU1 749 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 C8orf37Q96NL8 207 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 PRRX2Q99811 253 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 AP5M1Q9H0R1 490 aa4.04□□□□□ -1.76
HMGB1P24-202ENST00000615653 INO80B-WBP1J3KQ70 363 aa4.03□□□□□ -1.76
HMGB1P24-202ENST00000615653 RAMP2O60895 175 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms