RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 IFIH1Q9BYX4 1025 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 ARFGAP3Q9NP61 516 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 K7ERI5 159 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 CETPP11597 493 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 METTL23Q86XA0 190 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 PROCA1Q8NCQ7 364 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 PPP1R14CQ8TAE6 165 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 GPT2Q8TD30 523 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 NSMCE1Q8WV22 266 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 TUBGCP2Q9BSJ2 902 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 ZFYVE28Q9HCC9 887 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 PODXL2Q9NZ53 605 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 TXNDC16Q9P2K2 825 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 MYO5BQ9ULV0 1848 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 A0A1W2PRG0 241 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 FGFR2P21802 821 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 LRRC41Q15345 812 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 KAZALD1Q96I82 304 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 MYO1AQ9UBC5 1043 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 AFPP02771 609 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 CCNE1P24864 410 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 HUNKP57058 714 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 POLR2FP61218 127 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 RNASELQ05823 741 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 PPP4R3CPQ6ZMV5 832 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 STAG2Q8N3U4 1231 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 MAIP1Q8WWC4 291 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 EPSTI1Q96J88 318 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 CCDC94Q9BW85 323 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 EPB41L4AQ9HCS5 686 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 PRDM10Q9NQV6 1147 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 IKBKBO14920 756 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 P4HBP07237 508 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 PTK2Q05397 1052 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 ZNF365Q70YC5 407 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 PAGE5Q96GU1 130 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 FAM49AQ9H0Q0 323 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 ZNF302Q9NR11 478 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 TMEM260Q9NX78 707 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 MAN1B1Q9UKM7 699 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 E7EVH7 732 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 MYCP01106 439 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 MAN2A1Q16706 1144 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 PEX26Q7Z412 305 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 NLRP4Q96MN2 994 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 ANAPC4Q9UJX5 808 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 FAM169AQ9Y6X4 670 aa10.33□□□□□ -0.76
CLTCL1-208ENST00000615606 CAPN9O14815 690 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 CELF2O95319 508 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 SLC25A27O95847 323 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 SRGAP2CP0DJJ0 459 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 CATSPER4Q7RTX7 472 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 SRBD1Q8N5C6 995 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 POLR3GO15318 223 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 IL1R1P14778 569 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 QARSP47897 775 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 RPS6KA1Q15418 735 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 SCYL3Q8IZE3 742 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 MRFAP1L1Q96HT8 127 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 MAP3K14Q99558 947 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 RWDD2AQ9UIY3 292 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 PPP2R3BQ9Y5P8 575 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 BZW2Q9Y6E2 419 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 PDS5AQ29RF7 1337 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 IPO5O00410 1097 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 LDHAP00338 332 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 MRPS9P82933 396 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 RESP18Q5W5W9 173 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 TTBK2Q6IQ55 1244 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 GPR161Q8N6U8 529 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 OXER1Q8TDS5 423 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 IGDCC4Q8TDY8 1250 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 GJB4Q9NTQ9 266 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 PHKA2P46019 1235 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 TFAMQ00059 246 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 LRRC63Q05C16 580 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 SREBF2Q12772 1141 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 SND1Q7KZF4 910 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 GPIHBP1Q8IV16 184 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 GRAMD1CQ8IYS0 662 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 RAET1EQ8TD07 263 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 RPF1Q9H9Y2 349 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 KCNH4Q9UQ05 1017 aa10.32□□□□□ -0.76
CLTCL1-208ENST00000615606 CAMTA1Q9Y6Y1 1673 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 CCL15-CCL14A0A0B4J2E2 113 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 POTEMA6NI47 508 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 FERP16591 822 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 RFX1P22670 979 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PSMC5P62195 406 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 CXCL9Q07325 125 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 CCL15Q16663 113 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 HADHQ16836 314 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 UNC13DQ70J99 1090 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 SNX25Q9H3E2 840 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 PCIF1Q9H4Z3 704 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 SIGLEC1Q9BZZ2 1709 aa10.31□□□□□ -0.76
CLTCL1-208ENST00000615606 DYNC1I1O14576 645 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms