RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 RNF10Q8N5U6 811 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 SALL4Q9UJQ4 1053 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 SPDYE3A6NKU9 549 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 ADORA1P30542 326 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 SLC5A9Q2M3M2 681 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 SOGA3Q5TF21 947 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 KLHDC7AQ5VTJ3 777 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 SPATA21Q7Z572 469 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 DZIP3Q86Y13 1208 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 DDX23Q9BUQ8 820 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 RNF14Q9UBS8 474 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 RGS16O15492 202 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 GSTA1P08263 222 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 KRT16P08779 473 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 MSH2P43246 934 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 EMC10Q5UCC4 262 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 SH3RF1Q7Z6J0 888 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 PURBQ96QR8 312 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 VCXQ9H320 206 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 LY9Q9HBG7 655 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 FAM217BQ9NTX9 383 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 ZSWIM5Q9P217 1185 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 TRIM33Q9UPN9 1127 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 IQSEC3Q9UPP2 1182 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 SHBGP04278 402 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 PRPF4BQ13523 1007 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 RPS6KA1Q15418 735 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 METTL24Q5JXM2 366 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 FAM114A1Q8IWE2 563 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 LPIN2Q92539 896 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 FAM129AQ9BZQ8 928 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 PICK1Q9NRD5 415 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 RPS6KL1Q9Y6S9 549 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 PDS5AQ29RF7 1337 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 STRCP1A6NGW2 1772 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 DCCP43146 1447 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 C5orf60A6NFR6 353 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 LRRC53A6NM62 1247 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 ZNF268Q14587 947 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 SEPT2Q15019 361 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 LRRC14Q15048 493 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 CCDC6Q16204 474 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 TSNAXIP1Q2TAA8 658 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 MUM1Q2TAK8 710 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 AGBL2Q5U5Z8 902 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 LDHAL6AQ6ZMR3 332 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 ZNF662Q6ZS27 426 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 HOOK3Q86VS8 718 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 SYCP3Q8IZU3 236 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 LBHD1Q9BQE6 289 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 ISCUQ9H1K1 167 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 GOLPH3Q9H4A6 298 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 TMEM165Q9HC07 324 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 MLXIPLQ9NP71 852 aa11.33□□□□□ -0.6
TNFAIP3-208ENST00000615468 COL5A2P05997 1499 aaPredicted RBP11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 KRIT1O00522 736 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 PYGBP11216 843 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 FLT3P36888 993 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 UAP1Q16222 522 aaPredicted RBP11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 MFSD6Q6ZSS7 791 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 CCDC155Q8N6L0 562 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 CNBD1Q8NA66 436 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 FAM81AQ8TBF8 368 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 ZNF507Q8TCN5 953 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 UTYO14607 1347 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 TOM1O60784 492 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 BMP15O95972 392 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 UBA7P41226 1012 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 CUL1Q13616 776 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 KIAA0753Q2KHM9 967 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 PIK3AP1Q6ZUJ8 805 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 GORASP1Q9BQQ3 440 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 THAP9Q9H5L6 903 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 LMCD1Q9NZU5 365 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 AMACRQ9UHK6 382 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 MARF1Q9Y4F3 1742 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 FAM170AA1A519 330 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 SART1O43290 800 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 RFC5P40937 340 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 NCALDP61601 193 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 EARS2Q5JPH6 523 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 ERMARDQ5T6L9 678 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 RNF220Q5VTB9 566 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 ADAT2Q7Z6V5 191 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 ADSSL1Q8N142 457 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 FGD4Q96M96 766 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 RPS6KC1Q96S38 1066 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 SUDS3Q9H7L9 328 aaPredicted RBP11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 ETNK1Q9HBU6 452 aa11.32□□□□□ -0.6
TNFAIP3-208ENST00000615468 EYA2O00167 538 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 FOXP2O15409 715 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 SUN1O94901 812 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 GCLCP48506 637 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 SCNN1BP51168 640 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 MRPS35P82673 323 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 KLC1Q07866 573 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms