RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ARL13BQ3SXY8 428 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 EDC3Q96F86 508 aaKnown RBP10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 SEC62Q99442 399 aaKnown RBP10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 TRPV6Q9H1D0 765 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 RRN3P2A6NIE6 340 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 MAGEB2O15479 319 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 SORBS3O60504 671 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 RNF8O76064 485 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 PTGS1P23219 599 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 SMARCA1P28370 1054 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 PLCB4Q15147 1175 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 CCDC122Q5T0U0 273 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 SECISBP2LQ93073 1101 aaKnown RBP10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 OSBP2Q969R2 916 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 GSDMAQ96QA5 445 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 DAGLAQ9Y4D2 1042 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 EFNA5P52803 228 aa10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 CPSF3Q9UKF6 684 aaKnown RBP10.64□□□□□ -0.71
TNFRSF9-204ENST00000615230 ZNF521Q96K83 1311 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 PRKAB2O43741 272 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 SH3BP5O60239 455 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 ITPK1Q13572 414 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 MORC3Q14149 939 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 PFKFB3Q16875 520 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 IER5Q5VY09 327 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 ERO1BQ86YB8 467 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 YAF2Q8IY57 180 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 CCDC89Q8N998 374 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 RNF139Q8WU17 664 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 SEL1LQ9UBV2 794 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 PDS5AQ29RF7 1337 aaKnown RBP10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 HOXA2O43364 376 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 TFRCP02786 760 aaKnown RBP10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 P4HBP07237 508 aaKnown RBP10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 CPA1P15085 419 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 PTGDRQ13258 359 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 MAPK6Q16659 721 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 HS1BP3Q53T59 392 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 SIX6OS1Q8N1H7 587 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 PSPC1Q8WXF1 523 aaKnown RBP10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 SMARCAD1Q9H4L7 1026 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 FAM8A1Q9UBU6 413 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 ASAP2O43150 1006 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 GYS1P13807 737 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 PSMC5P62195 406 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 ZNF560Q96MR9 790 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 TMEM47Q9BQJ4 181 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 MROH8Q9H579 483 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 XRCC6P12956 609 aaKnown RBP eCLIP10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 NSFP46459 744 aaKnown RBP10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 MTMR2Q13614 643 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 MSTO1Q9BUK6 570 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 PCDHB4Q9Y5E5 795 aa10.63□□□□□ -0.71
TNFRSF9-204ENST00000615230 GMNNO75496 209 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 STAG3L1P0CL83 205 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 PPARGP37231 505 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 LMNB2Q03252 620 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 VEPH1Q14D04 833 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 KRBA2Q6ZNG9 492 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 RSRC2Q7L4I2 434 aaKnown RBP10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 PPP1R9BQ96SB3 815 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 MXD3Q9BW11 206 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 UBR1Q8IWV7 1749 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 NBPF26B4DH59 902 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 CFAP157Q5JU67 520 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 NBPF10Q6P3W6 841 aaKnown RBP10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 NBPF15Q8N660 670 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 FBXO18Q8NFZ0 1043 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 KCNJ18B7U540 433 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 AFPP02771 609 aaKnown RBP10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 PRDX5P30044 214 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 RFC5P40937 340 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 KCNJ12Q14500 433 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 PCSK9Q8NBP7 692 aaKnown RBP10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 SYMPKQ92797 1274 aaKnown RBP10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 MAP3K14Q99558 947 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 VPS16Q9H269 839 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 PIDD1Q9HB75 910 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 LRRC4Q9HBW1 653 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 K7ERI5 159 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 PFKFB1P16118 471 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 RDM1Q8NG50 284 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 PRIMPOLQ96LW4 560 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 ANTXR1Q9H6X2 564 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 ST7Q9NRC1 585 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 CEMIPQ8WUJ3 1361 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 GSPT1P15170 499 aaKnown RBP10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 SNX17Q15036 470 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 EFHBQ8N7U6 833 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 TDRD7Q8NHU6 1098 aaKnown RBP10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 P3H4Q92791 437 aa10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 TRMT1Q9NXH9 659 aaKnown RBP10.62□□□□□ -0.71
TNFRSF9-204ENST00000615230 hCG_1642624A0A1W2PR95 340 aa10.61□□□□□ -0.71
TNFRSF9-204ENST00000615230 F5H6K3 240 aa10.61□□□□□ -0.71
TNFRSF9-204ENST00000615230 DLATP10515 647 aaKnown RBP10.61□□□□□ -0.71
TNFRSF9-204ENST00000615230 SLC12A2P55011 1212 aa10.61□□□□□ -0.71
TNFRSF9-204ENST00000615230 KLRC3Q07444 240 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms