RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 RNF146Q9NTX7 359 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 WRAP73Q9P2S5 460 aaPredicted RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 ADD3Q9UEY8 706 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 PPP1R9AQ9ULJ8 1098 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 DNM3Q9UQ16 869 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 TELO2Q9Y4R8 837 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 LTBP3Q9NS15 1303 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 ZNF646O15015 1829 aaPredicted RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 CYP3A7-CYP3A51PA0A087WV96 503 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 A0A0U1RQJ8 604 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 IPO5O00410 1097 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 ATP9AO75110 1047 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 CYP11B2P19099 503 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 CYP3A7P24462 503 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 FXR1P51114 621 aaKnown RBP eCLIP3.83□□□□□ -1.8
LIG4-205ENST00000614526 CASP5P51878 434 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 GSDMDP57764 484 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 KCNA1Q09470 495 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 COASYQ13057 564 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 UTP14CQ5TAP6 766 aaKnown RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 ARHGEF16Q5VV41 709 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 CDKAL1Q5VV42 579 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 TTI2Q6NXR4 508 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 CNNM4Q6P4Q7 775 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 RNF207Q6ZRF8 634 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 EEPD1Q7L9B9 569 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 OTOP1Q7RTM1 612 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 PPFIBP1Q86W92 1011 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 SYTL5Q8TDW5 730 aaPredicted RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 ATRIPQ8WXE1 791 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 LPAR1Q92633 364 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 DNAJC19Q96DA6 116 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 RUSC1Q9BVN2 902 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 UNC45AQ9H3U1 944 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 KCNH7Q9NS40 1196 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 TMOD4Q9NZQ9 345 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 MAGEC2Q9UBF1 373 aaPredicted RBP3.83□□□□□ -1.8
LIG4-205ENST00000614526 STK17AQ9UEE5 414 aa3.83□□□□□ -1.8
LIG4-205ENST00000614526 A0A1B0GTH6 734 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 SOWAHDA6NJG2 315 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 TRAF5O00463 557 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 IRF6O14896 467 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 PRPF6O94906 941 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 SLITRK3O94933 977 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 CCNE1P24864 410 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 MMP14P50281 582 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 MRPS9P82933 396 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 RBM10P98175 930 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 FSTL1Q12841 308 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 KCNB1Q14721 858 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 COG2Q14746 738 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 TMEM132BQ14DG7 1078 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 SUPT20HL1Q3ZLR7 823 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 Q4G0T1 1027 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 TMEM119Q4V9L6 283 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 FAM26FQ5R3K3 315 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 E4F1Q66K89 784 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 UNC13DQ70J99 1090 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 SFR1Q86XK3 245 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 TC2NQ8N9U0 490 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 ANKRD20A12PQ8NF67 263 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 ERMNQ8TAM6 284 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 ZNF526Q8TF50 670 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 CNOT6LQ96LI5 555 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 REEP2Q9BRK0 252 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 TUBGCP2Q9BSJ2 902 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 CRACR2AQ9BSW2 395 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 CUEDC2Q9H467 287 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 AS3MTQ9HBK9 375 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 RNF216Q9NWF9 866 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 IMPACTQ9P2X3 320 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 VAV3Q9UKW4 847 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 FER1L6Q2WGJ9 1857 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 POLR2AP24928 1970 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 GREB1LQ9C091 1923 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 PIK3CDO00329 1044 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 CLIC2O15247 247 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 PPP1R12BO60237 982 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 USP14P54578 494 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 CNTN2Q02246 1040 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 APBA1Q02410 837 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 TBC1D8BQ0IIM8 1120 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 ENOX2Q16206 610 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 ZC2HC1CQ53FD0 456 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 MAP1SQ66K74 1059 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 HAUS3Q68CZ6 603 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 DPY19L2Q6NUT2 758 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 TOGARAM2Q6ZUX3 1019 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 ILDR2Q71H61 639 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 CCDC150Q8NCX0 1101 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 FAM20AQ96MK3 541 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 BAG1Q99933 345 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 NOC4LQ9BVI4 516 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 NT5C3AQ9H0P0 336 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 ADARB2Q9NS39 739 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 RABGAP1Q9Y3P9 1069 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 CSADQ9Y600 493 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 COL2A1P02458 1487 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 UQCRHLA0A096LP55 91 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 AKR1B15C9JRZ8 316 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms