RNA–Protein interactions for RNA: ENST00000614035.4

TNFAIP3-207, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-207ENST00000614035 CA3P07451 260 aa20.3■□□□□ 0.84
TNFAIP3-207ENST00000614035 EXOSC10Q01780 885 aaKnown RBP20.3■□□□□ 0.84
TNFAIP3-207ENST00000614035 CNKSR3Q6P9H4 555 aa20.3■□□□□ 0.84
TNFAIP3-207ENST00000614035 APOA5Q6Q788 366 aa20.3■□□□□ 0.84
TNFAIP3-207ENST00000614035 CYFIP1Q7L576 1253 aa20.3■□□□□ 0.84
TNFAIP3-207ENST00000614035 GPR20Q99678 358 aa20.3■□□□□ 0.84
TNFAIP3-207ENST00000614035 TRANK1O15050 2925 aa20.3■□□□□ 0.84
TNFAIP3-207ENST00000614035 DOCK5Q9H7D0 1870 aa20.3■□□□□ 0.84
TNFAIP3-207ENST00000614035 CDC45O75419 566 aa20.29■□□□□ 0.84
TNFAIP3-207ENST00000614035 WDR5P61964 334 aaKnown RBP20.29■□□□□ 0.84
TNFAIP3-207ENST00000614035 ZNF618Q5T7W0 954 aa20.29■□□□□ 0.84
TNFAIP3-207ENST00000614035 SYNE3Q6ZMZ3 975 aa20.29■□□□□ 0.84
TNFAIP3-207ENST00000614035 DHX32Q7L7V1 743 aaKnown RBP20.29■□□□□ 0.84
TNFAIP3-207ENST00000614035 NLRX1Q86UT6 975 aa20.29■□□□□ 0.84
TNFAIP3-207ENST00000614035 CCDC82Q8N4S0 544 aa20.29■□□□□ 0.84
TNFAIP3-207ENST00000614035 PTPRSQ13332 1948 aa20.29■□□□□ 0.84
TNFAIP3-207ENST00000614035 hCG_1642624A0A1W2PR95 340 aa20.28■□□□□ 0.84
TNFAIP3-207ENST00000614035 C17orf102A2RUQ5 167 aa20.28■□□□□ 0.84
TNFAIP3-207ENST00000614035 SMIM10L2AP0DMW4 78 aa20.28■□□□□ 0.84
TNFAIP3-207ENST00000614035 SMIM10L2BP0DMW5 78 aa20.28■□□□□ 0.84
TNFAIP3-207ENST00000614035 KCNJ6P48051 423 aa20.28■□□□□ 0.84
TNFAIP3-207ENST00000614035 MBTPS1Q14703 1052 aa20.28■□□□□ 0.84
TNFAIP3-207ENST00000614035 RASEFQ8IZ41 740 aa20.28■□□□□ 0.84
TNFAIP3-207ENST00000614035 GIMAP8Q8ND71 665 aaPredicted RBP20.28■□□□□ 0.84
TNFAIP3-207ENST00000614035 GPRASP2Q96D09 838 aa20.28■□□□□ 0.84
TNFAIP3-207ENST00000614035 RBM28Q9NW13 759 aaKnown RBP20.28■□□□□ 0.84
TNFAIP3-207ENST00000614035 ABHD14A-ACY1A0A1B0GW23 586 aa20.27■□□□□ 0.84
TNFAIP3-207ENST00000614035 KIF28PB7ZC32 967 aa20.27■□□□□ 0.84
TNFAIP3-207ENST00000614035 IGFBP4P22692 258 aa20.27■□□□□ 0.84
TNFAIP3-207ENST00000614035 KRT32Q14532 448 aa20.27■□□□□ 0.84
TNFAIP3-207ENST00000614035 HEATR3Q7Z4Q2 680 aa20.27■□□□□ 0.84
TNFAIP3-207ENST00000614035 ATP6V0A1Q93050 837 aa20.27■□□□□ 0.84
TNFAIP3-207ENST00000614035 CDHR1Q96JP9 859 aa20.27■□□□□ 0.84
TNFAIP3-207ENST00000614035 EMSYQ7Z589 1322 aa20.27■□□□□ 0.84
TNFAIP3-207ENST00000614035 CNTNAP5Q8WYK1 1306 aa20.27■□□□□ 0.84
TNFAIP3-207ENST00000614035 EFCAB14O75071 495 aa20.27■□□□□ 0.83
TNFAIP3-207ENST00000614035 ITGB5P18084 799 aa20.27■□□□□ 0.83
TNFAIP3-207ENST00000614035 TAP1Q03518 808 aa20.27■□□□□ 0.83
TNFAIP3-207ENST00000614035 UBE2SQ16763 222 aa20.27■□□□□ 0.83
TNFAIP3-207ENST00000614035 TCTN1Q2MV58 587 aa20.27■□□□□ 0.83
TNFAIP3-207ENST00000614035 ADCK5Q3MIX3 580 aa20.27■□□□□ 0.83
TNFAIP3-207ENST00000614035 TEX2Q8IWB9 1127 aa20.27■□□□□ 0.83
TNFAIP3-207ENST00000614035 RNPEPQ9H4A4 650 aa20.27■□□□□ 0.83
TNFAIP3-207ENST00000614035 ZNF215Q9UL58 517 aaPredicted RBP20.27■□□□□ 0.83
TNFAIP3-207ENST00000614035 BRPF3Q9ULD4 1205 aa20.27■□□□□ 0.83
TNFAIP3-207ENST00000614035 SPDYE3A6NKU9 549 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 ZBTB43O43298 467 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 KCNA2P16389 499 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 THPOP40225 353 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 FUT2Q10981 343 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 RTN1Q16799 776 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 TRIM50Q86XT4 487 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 PPM1EQ8WY54 764 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 TCEANC2Q96MN5 208 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 PCDHA6Q9UN73 950 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 TELO2Q9Y4R8 837 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 PCDHA8Q9Y5H6 950 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 UBIAD1Q9Y5Z9 338 aa20.26■□□□□ 0.83
TNFAIP3-207ENST00000614035 TTC28Q96AY4 2481 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 SPTBN5Q9NRC6 3674 aaKnown RBP20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 RSPH10B2B2RC85 870 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 TREHO43280 583 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 TLL1O43897 1013 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 CAND2O75155 1236 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 LGR5O75473 907 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 ARHGEF15O94989 841 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 HMGB1P09429 215 aaKnown RBP20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 RSPH10BP0C881 870 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 GNAT1P11488 350 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 POU3F3P20264 500 aaPredicted RBP20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 RCAN1P53805 252 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 DEFB103AP81534 67 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 IKBKEQ14164 716 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 WWC2Q6AWC2 1192 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 SYMPKQ92797 1274 aaKnown RBP20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 PRDM6Q9NQX0 595 aa20.25■□□□□ 0.83
TNFAIP3-207ENST00000614035 MAFGO15525 162 aa20.24■□□□□ 0.83
TNFAIP3-207ENST00000614035 ATP9AO75110 1047 aa20.24■□□□□ 0.83
TNFAIP3-207ENST00000614035 ADAM17P78536 824 aa20.24■□□□□ 0.83
TNFAIP3-207ENST00000614035 SP4Q02446 784 aa20.24■□□□□ 0.83
TNFAIP3-207ENST00000614035 MKRN4PQ13434 485 aaPredicted RBP20.24■□□□□ 0.83
TNFAIP3-207ENST00000614035 MTMR1Q13613 665 aa20.24■□□□□ 0.83
TNFAIP3-207ENST00000614035 TJAP1Q5JTD0 557 aa20.24■□□□□ 0.83
TNFAIP3-207ENST00000614035 PPP1R18Q6NYC8 613 aa20.24■□□□□ 0.83
TNFAIP3-207ENST00000614035 ATXN2LQ8WWM7 1075 aaKnown RBP20.24■□□□□ 0.83
TNFAIP3-207ENST00000614035 JADE2Q9NQC1 790 aa20.24■□□□□ 0.83
TNFAIP3-207ENST00000614035 SETD4Q9NVD3 440 aa20.24■□□□□ 0.83
TNFAIP3-207ENST00000614035 hCG_1984214I3L0E3 225 aa20.23■□□□□ 0.83
TNFAIP3-207ENST00000614035 GJB5O95377 273 aa20.23■□□□□ 0.83
TNFAIP3-207ENST00000614035 CCDC85BQ15834 202 aaPredicted RBP20.23■□□□□ 0.83
TNFAIP3-207ENST00000614035 UTP14CQ5TAP6 766 aaKnown RBP20.23■□□□□ 0.83
TNFAIP3-207ENST00000614035 TYW1BQ6NUM6 668 aa20.23■□□□□ 0.83
TNFAIP3-207ENST00000614035 ZNF713Q8N859 430 aaPredicted RBP20.23■□□□□ 0.83
TNFAIP3-207ENST00000614035 KCNB2Q92953 911 aa20.23■□□□□ 0.83
TNFAIP3-207ENST00000614035 EHMT1Q9H9B1 1298 aa20.23■□□□□ 0.83
TNFAIP3-207ENST00000614035 THEGQ9P2T0 379 aa20.23■□□□□ 0.83
TNFAIP3-207ENST00000614035 REV3LO60673 3130 aa20.23■□□□□ 0.83
TNFAIP3-207ENST00000614035 NRCAMQ92823 1304 aa20.22■□□□□ 0.83
TNFAIP3-207ENST00000614035 KLF18A0A0U1RQI7 1052 aa20.22■□□□□ 0.83
TNFAIP3-207ENST00000614035 EPOPA6NHQ4 379 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms