RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PCNX4Q63HM2 1172 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 TTLL11Q8NHH1 800 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 KCNK16Q96T55 309 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 LSP1P33241 339 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 INPP5AQ14642 412 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 MAN2A1Q16706 1144 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 FOXP1Q9H334 677 aaPredicted RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 GGA2Q9UJY4 613 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 TRPC6Q9Y210 931 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 ABCC4O15439 1325 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 ADCY9O60503 1353 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 MYH7P12883 1935 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 CA4P22748 312 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 BFSP1Q12934 665 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 TMED2Q15363 201 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 MAGOHBQ96A72 148 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 FTOQ9C0B1 505 aaKnown RBP eCLIP9.44□□□□□ -0.9
TTC28-208ENST00000612946 OSBPL3Q9H4L5 887 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 PLEKHA4Q9H4M7 779 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 MYH15Q9Y2K3 1946 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 TRIM66O15016 1216 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 TPP2P29144 1249 aaPredicted RBP9.43□□□□□ -0.9
TTC28-208ENST00000612946 SERPINB8P50452 374 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 LRRC63Q05C16 580 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 ANGPT1Q15389 498 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 CALCRLQ16602 461 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 KRT40Q6A162 431 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 PRR23AA6NEV1 266 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 TSHZ3Q63HK5 1081 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 SUCLA2Q9P2R7 463 aaPredicted RBP9.43□□□□□ -0.9
TTC28-208ENST00000612946 ZBTB7BO15156 539 aaPredicted RBP9.43□□□□□ -0.9
TTC28-208ENST00000612946 RASSF7Q02833 373 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 GRM1Q13255 1194 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 UBE3BQ7Z3V4 1068 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 PDIK1LQ8N165 341 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 GINS4Q9BRT9 223 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 CARD10Q9BWT7 1032 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 SLC4A4Q9Y6R1 1079 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 GOLGA8IPA6NC78 632 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 RIBC1Q8N443 379 aaPredicted RBP9.43□□□□□ -0.9
TTC28-208ENST00000612946 U2AF1L4Q8WU68 220 aaKnown RBP9.43□□□□□ -0.9
TTC28-208ENST00000612946 TUBGCP2Q9BSJ2 902 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 LRRC2Q9BYS8 371 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 NFU1Q9UMS0 254 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 HIC1Q14526 733 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 MORF4L2Q15014 288 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 DIS3L2Q8IYB7 885 aaKnown RBP9.43□□□□□ -0.9
TTC28-208ENST00000612946 FBXL13Q8NEE6 735 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 HAUS7Q99871 368 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 NOD2Q9HC29 1040 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 F6X3S4 739 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 KPNA4O00629 521 aaPredicted RBP9.43□□□□□ -0.9
TTC28-208ENST00000612946 ATP5BP06576 529 aaKnown RBP9.43□□□□□ -0.9
TTC28-208ENST00000612946 CRELD2Q6UXH1 353 aaPredicted RBP9.43□□□□□ -0.9
TTC28-208ENST00000612946 FAM81AQ8TBF8 368 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 UNC45AQ9H3U1 944 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 UBAP1Q9NZ09 502 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 TTC37Q6PGP7 1564 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 CARMIL3Q8ND23 1372 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 CHRNA3P32297 505 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 TMEM132EQ6IEE7 984 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 CYB5D1Q6P9G0 228 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 ADCK1Q86TW2 530 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 TRIM69Q86WT6 500 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 ACRBPQ8NEB7 543 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 DACH2Q96NX9 599 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 PI4KAP2A4QPH2 592 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 CHEK2O96017 543 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 GNAT1P11488 350 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 CCDC117Q8IWD4 279 aaPredicted RBP9.43□□□□□ -0.9
TTC28-208ENST00000612946 PI4KAP1Q8N8J0 262 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 ZBTB10Q96DT7 871 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 SLC40A1Q9NP59 571 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 KIF20BQ96Q89 1820 aa9.43□□□□□ -0.9
TTC28-208ENST00000612946 MAGOHP61326 146 aaKnown RBP9.42□□□□□ -0.9
TTC28-208ENST00000612946 LONRF3Q496Y0 759 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 NCAPG2Q86XI2 1143 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 CYFIP2Q96F07 1278 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 ELAC2Q9BQ52 826 aaKnown RBP9.42□□□□□ -0.9
TTC28-208ENST00000612946 RCOR1Q9UKL0 485 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 CPP00450 1065 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 ATP6V1E1P36543 226 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 SGO2Q562F6 1265 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 C16orf89Q6UX73 402 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 SLFN12Q8IYM2 578 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 ZNF473Q8WTR7 871 aaKnown RBP9.42□□□□□ -0.9
TTC28-208ENST00000612946 TRIM8Q9BZR9 551 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 ABCC1P33527 1531 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 TNNC2P02585 160 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 GJA8P48165 433 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 RAB15P59190 212 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 C2orf54Q08AI8 447 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 SPATA21Q7Z572 469 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 PLD3Q8IV08 490 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 ZNF713Q8N859 430 aaPredicted RBP9.42□□□□□ -0.9
TTC28-208ENST00000612946 OLFML2BQ68BL8 750 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 TRMT10CQ7L0Y3 403 aaKnown RBP9.42□□□□□ -0.9
TTC28-208ENST00000612946 ST13P5Q8NFI4 369 aaPredicted RBP9.42□□□□□ -0.9
TTC28-208ENST00000612946 DNAJC12Q9UKB3 198 aa9.42□□□□□ -0.9
TTC28-208ENST00000612946 MKL2Q9ULH7 1088 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms