RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ISM2Q6H9L7 571 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 REPS2Q8NFH8 660 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 FAM20AQ96MK3 541 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 TRERF1Q96PN7 1200 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 MMTAG2Q9BU76 263 aaKnown RBP10.02□□□□□ -0.81
CCDC47-207ENST00000612558 ELP3Q9H9T3 547 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 RLFQ13129 1914 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 PAPPA2Q9BXP8 1791 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 UNCXA6NJT0 531 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 SMTNL1A8MU46 457 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 RNF223E7ERA6 249 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 NFIBO00712 420 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 IRF6O14896 467 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 SLC26A4O43511 780 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 DGAT1O75907 488 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 PLCG1P19174 1290 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 MUM1L1Q5H9M0 696 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 MOB2Q70IA6 237 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 DHX40Q8IX18 779 aaKnown RBP10.01□□□□□ -0.81
CCDC47-207ENST00000612558 MLKLQ8NB16 471 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 PROCA1Q8NCQ7 364 aaPredicted RBP10.01□□□□□ -0.81
CCDC47-207ENST00000612558 ETNPPLQ8TBG4 499 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 LENG9Q96B70 501 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 WNK4Q96J92 1243 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 MAF1Q9H063 256 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 HOMER2Q9NSB8 354 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 KBTBD4Q9NVX7 518 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 DACH1Q9UI36 760 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 OTOFQ9HC10 1997 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 PTPRFP10586 1907 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 IGLV3-22A0A075B6J6 115 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 A0A0G2JLL6 359 aaPredicted RBP10.01□□□□□ -0.81
CCDC47-207ENST00000612558 MSH4O15457 936 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 ADCY5O95622 1261 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 BMP6P22004 513 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 HOXA7P31268 230 aaPredicted RBP10.01□□□□□ -0.81
CCDC47-207ENST00000612558 PLCB2Q00722 1185 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 AMPD3Q01432 767 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 SEMA3FQ13275 785 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 GRB10Q13322 594 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 PPIL2Q13356 520 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 TKFCQ3LXA3 575 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 CEP55Q53EZ4 464 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 CT47A1Q5JQC4 288 aaPredicted RBP10.01□□□□□ -0.81
CCDC47-207ENST00000612558 LDLRAD1Q5T700 205 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 BLOC1S3Q6QNY0 202 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 PRRT2Q7Z6L0 340 aaPredicted RBP10.01□□□□□ -0.81
CCDC47-207ENST00000612558 AOPEPQ8N6M6 819 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 ANKLE1Q8NAG6 615 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 SYTL5Q8TDW5 730 aaPredicted RBP10.01□□□□□ -0.81
CCDC47-207ENST00000612558 SNX29Q8TEQ0 813 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 STAMQ92783 540 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 GJA10Q969M2 543 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 CDK5RAP3Q96JB5 506 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 CLMNQ96JQ2 1002 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 PLIN2Q99541 437 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 RNF146Q9NTX7 359 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 STK17AQ9UEE5 414 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 ZNF214Q9UL59 606 aaPredicted RBP10.01□□□□□ -0.81
CCDC47-207ENST00000612558 KCNH4Q9UQ05 1017 aa10.01□□□□□ -0.81
CCDC47-207ENST00000612558 RPTORQ8N122 1335 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 IKBKBO14920 756 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 CASP1P29466 404 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 RPS6P62753 249 aaKnown RBP10□□□□□ -0.81
CCDC47-207ENST00000612558 TPM4P67936 248 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 SETQ01105 290 aaPredicted RBP10□□□□□ -0.81
CCDC47-207ENST00000612558 CUL4BQ13620 913 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 TMEM132BQ14DG7 1078 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 HYIQ5T013 277 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 TREML2Q5T2D2 321 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 SNRNP48Q6IEG0 339 aaKnown RBP10□□□□□ -0.81
CCDC47-207ENST00000612558 GADL1Q6ZQY3 521 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 RNF207Q6ZRF8 634 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 ZNF598Q86UK7 904 aaKnown RBP10□□□□□ -0.81
CCDC47-207ENST00000612558 PLA2G4DQ86XP0 818 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 MB21D1Q8N884 522 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 CYP2W1Q8TAV3 490 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 PNMA5Q96PV4 448 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 TEX13BQ9BXU2 312 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 NT5C3AQ9H0P0 336 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 BLZF1Q9H2G9 400 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 RMND1Q9NWS8 449 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 COL20A1Q9P218 1284 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 RIPK3Q9Y572 518 aa10□□□□□ -0.81
CCDC47-207ENST00000612558 KDM3AQ9Y4C1 1321 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 COL11A1P12107 1806 aaPredicted RBP9.99□□□□□ -0.81
CCDC47-207ENST00000612558 MEIS1O00470 390 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 AP5Z1O43299 807 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 RPN1P04843 607 aaKnown RBP9.99□□□□□ -0.81
CCDC47-207ENST00000612558 STAT3P40763 770 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 UBXN2AP68543 259 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 SPIRE1Q08AE8 756 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 TMEM119Q4V9L6 283 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 MAP1SQ66K74 1059 aaPredicted RBP9.99□□□□□ -0.81
CCDC47-207ENST00000612558 HAUS3Q68CZ6 603 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 NSMFQ6X4W1 530 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 SV2BQ7L1I2 683 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 NIPA1Q7RTP0 329 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 ERMNQ8TAM6 284 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms