RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 ELF1P32519 619 aa13.33□□□□□ -0.27
HLCS-207ENST00000612277 PTK2Q05397 1052 aa13.33□□□□□ -0.27
HLCS-207ENST00000612277 EXOC3L4Q17RC7 722 aa13.33□□□□□ -0.27
HLCS-207ENST00000612277 SNRNP27Q8WVK2 155 aaKnown RBP13.33□□□□□ -0.27
HLCS-207ENST00000612277 ZNF653Q96CK0 615 aa13.33□□□□□ -0.27
HLCS-207ENST00000612277 NLRP3Q96P20 1036 aa13.33□□□□□ -0.27
HLCS-207ENST00000612277 IL10P22301 178 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 SERPINB3P29508 390 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 BTBD6Q96KE9 485 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 TMEM245Q9H330 911 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 OLFML3Q9NRN5 406 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 DCDC2Q9UHG0 476 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 MAGED2Q9UNF1 606 aaPredicted RBP13.33□□□□□ -0.28
HLCS-207ENST00000612277 GMNCA6NCL1 334 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 GCFC2P16383 781 aaKnown RBP13.33□□□□□ -0.28
HLCS-207ENST00000612277 RBL2Q08999 1139 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 DMC1Q14565 340 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 TRIM71Q2Q1W2 868 aaKnown RBP13.33□□□□□ -0.28
HLCS-207ENST00000612277 TMEM154Q6P9G4 183 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 CDR2LQ86X02 465 aaPredicted RBP13.33□□□□□ -0.28
HLCS-207ENST00000612277 PYROXD1Q8WU10 500 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 STK17AQ9UEE5 414 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 NCAPD3P42695 1498 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 AFPP02771 609 aaKnown RBP13.33□□□□□ -0.28
HLCS-207ENST00000612277 PYGMP11217 842 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 CCDC142Q17RM4 750 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 PPP1R2P3Q6NXS1 205 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 PPHLN1Q8NEY8 458 aaKnown RBP13.33□□□□□ -0.28
HLCS-207ENST00000612277 RFWD2Q8NHY2 731 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 SOS1Q07889 1333 aaPredicted RBP13.33□□□□□ -0.28
HLCS-207ENST00000612277 H0YCG3 227 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 TRAPPC10P48553 1259 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 FAM180AQ6UWF9 173 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 CCDC103Q8IW40 242 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 TEX2Q8IWB9 1127 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 CCNYQ8ND76 341 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 SETDB2Q96T68 719 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 DENND2AQ9ULE3 1009 aa13.33□□□□□ -0.28
HLCS-207ENST00000612277 GOLGA8IPA6NC78 632 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 F8W8V4 182 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 HSPA1AP0DMV8 641 aaKnown RBP13.32□□□□□ -0.28
HLCS-207ENST00000612277 HSPA1BP0DMV9 641 aaKnown RBP13.32□□□□□ -0.28
HLCS-207ENST00000612277 KCNA3P22001 575 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 GYS2P54840 703 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 NR1H3Q13133 447 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 FBXO38Q6PIJ6 1188 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 NLRP14Q86W24 1093 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 ADAM21Q9UKJ8 722 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 PRG3Q9Y2Y8 225 aaPredicted RBP13.32□□□□□ -0.28
HLCS-207ENST00000612277 GRIN2BQ13224 1484 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 STX3Q13277 289 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 ADAM9Q13443 819 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 EXT2Q93063 718 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 KIF2CQ99661 725 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 ABCF3Q9NUQ8 709 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 COPS6Q7L5N1 327 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 EPM2AIP1Q7L775 607 aaPredicted RBP13.32□□□□□ -0.28
HLCS-207ENST00000612277 CNOT6LQ96LI5 555 aaKnown RBP13.32□□□□□ -0.28
HLCS-207ENST00000612277 AOX1Q06278 1338 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 GOLGA8RI6L899 631 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 BRD1O95696 1058 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 KITP10721 976 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 SLC7A5Q01650 507 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 RUNX1T1Q06455 604 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 DRP2Q13474 957 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 TRIP13Q15645 432 aaPredicted RBP13.32□□□□□ -0.28
HLCS-207ENST00000612277 CNGA3Q16281 694 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 C10orf76Q5T2E6 689 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 TTLL7Q6ZT98 887 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 NOSTRINQ8IVI9 506 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 OPTNQ96CV9 577 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 AATFQ9NY61 560 aaKnown RBP eCLIP13.32□□□□□ -0.28
HLCS-207ENST00000612277 KRT37O76014 449 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.32□□□□□ -0.28
HLCS-207ENST00000612277 NDEL1Q9GZM8 345 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 ETNK1Q9HBU6 452 aa13.32□□□□□ -0.28
HLCS-207ENST00000612277 KLC1Q07866 573 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 ZBTB8OSQ8IWT0 167 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 TRIM63Q969Q1 353 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 ABHD8Q96I13 439 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 NYXQ9GZU5 481 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 LSG1Q9H089 658 aaKnown RBP13.31□□□□□ -0.28
HLCS-207ENST00000612277 RALGAPBQ86X10 1494 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 BBS9Q3SYG4 887 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 SPOUT1Q5T280 376 aaKnown RBP13.31□□□□□ -0.28
HLCS-207ENST00000612277 LRRC8EQ6NSJ5 796 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 SPATA17Q96L03 361 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 SIKE1Q9BRV8 207 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 BRD8Q9H0E9 1235 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 GTSE1Q9NYZ3 720 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 PCDHB4Q9Y5E5 795 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 TMCC1O94876 653 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 DLGAP3O95886 979 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 CXCR5P32302 372 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 HADHAP40939 763 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 MECOMQ03112 1051 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 WASHC5Q12768 1159 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 PTK2BQ14289 1009 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 ANGPT1Q15389 498 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 TRIM16LQ309B1 348 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms