RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 CCL15Q16663 113 aa13.78□□□□□ -0.2
CBWD1-220ENST00000612045 CT47A1Q5JQC4 288 aaPredicted RBP13.78□□□□□ -0.2
CBWD1-220ENST00000612045 B3GNT9Q6UX72 402 aa13.78□□□□□ -0.2
CBWD1-220ENST00000612045 PPP4R3CPQ6ZMV5 832 aa13.78□□□□□ -0.2
CBWD1-220ENST00000612045 EIF2AK1Q9BQI3 630 aaKnown RBP13.78□□□□□ -0.2
CBWD1-220ENST00000612045 POLR3CQ9BUI4 534 aaPredicted RBP13.78□□□□□ -0.2
CBWD1-220ENST00000612045 TEKT3Q9BXF9 490 aa13.78□□□□□ -0.2
CBWD1-220ENST00000612045 SLC45A1Q9Y2W3 748 aa13.78□□□□□ -0.2
CBWD1-220ENST00000612045 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 MYMKA6NI61 221 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 E9PMD0 336 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 CHMP2AO43633 222 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 ZBTB48P10074 688 aaPredicted RBP13.77□□□□□ -0.21
CBWD1-220ENST00000612045 ERCC3P19447 782 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 MYL5Q02045 173 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 SEMA3FQ13275 785 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 Q3C1V9 767 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 KMT5BQ4FZB7 885 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 ZNF658Q5TYW1 1059 aaPredicted RBP13.77□□□□□ -0.21
CBWD1-220ENST00000612045 SPRYD7Q5W111 196 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 POTEGQ6S5H5 508 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 SMYD4Q8IYR2 804 aaPredicted RBP13.77□□□□□ -0.21
CBWD1-220ENST00000612045 BRI3BPQ8WY22 251 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 HSD17B14Q9BPX1 270 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 LRRC27Q9C0I9 530 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 UNC45AQ9H3U1 944 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 LCTP09848 1927 aa13.77□□□□□ -0.21
CBWD1-220ENST00000612045 TESPA1A2RU30 521 aaPredicted RBP13.76□□□□□ -0.21
CBWD1-220ENST00000612045 PPP1R3GB7ZBB8 358 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 BTBD19C9JJ37 291 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 PDHXO00330 501 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 DHX15O43143 795 aaKnown RBP13.76□□□□□ -0.21
CBWD1-220ENST00000612045 RHOBTB3O94955 611 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 PLA2G4BP0C869 781 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 CYP2C8P10632 490 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
CBWD1-220ENST00000612045 ERCC5P28715 1186 aaPredicted RBP13.76□□□□□ -0.21
CBWD1-220ENST00000612045 COPB2P35606 906 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 ASIC1P78348 528 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 CYP4A11Q02928 519 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 ITGB3BPQ13352 177 aaPredicted RBP13.76□□□□□ -0.21
CBWD1-220ENST00000612045 CNNM4Q6P4Q7 775 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 GTF3C2Q8WUA4 911 aaPredicted RBP13.76□□□□□ -0.21
CBWD1-220ENST00000612045 PKD2L1Q9P0L9 805 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 SLITRK3O94933 977 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 HUNKP57058 714 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 TPM4P67936 248 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 CNTN2Q02246 1040 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 SARM1Q6SZW1 724 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
CBWD1-220ENST00000612045 ANKRD23Q86SG2 305 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 NLRX1Q86UT6 975 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 KCTD17Q8N5Z5 321 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 GPRASP2Q96D09 838 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 INPP4AQ96PE3 977 aaPredicted RBP13.76□□□□□ -0.21
CBWD1-220ENST00000612045 IWS1Q96ST2 819 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 R3HDMLQ9H3Y0 253 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 TUFT1Q9NNX1 390 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 TBC1D22BQ9NU19 505 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 RGL1Q9NZL6 768 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 DNM3Q9UQ16 869 aa13.76□□□□□ -0.21
CBWD1-220ENST00000612045 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 DDX39AO00148 427 aaKnown RBP13.75□□□□□ -0.21
CBWD1-220ENST00000612045 MAFGO15525 162 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 STAM2O75886 525 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 PSMC6P62333 389 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 ERVK-9P63128 1117 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 ERVK-24P63145 666 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 EPHA7Q15375 998 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 ENOX1Q8TC92 643 aaKnown RBP13.75□□□□□ -0.21
CBWD1-220ENST00000612045 SMCR8Q8TEV9 937 aaPredicted RBP13.75□□□□□ -0.21
CBWD1-220ENST00000612045 DDX12PQ92771 950 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 CCDC47Q96A33 483 aaKnown RBP13.75□□□□□ -0.21
CBWD1-220ENST00000612045 DYDC2Q96IM9 177 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 HSD3B7Q9H2F3 369 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 EXOC1Q9NV70 894 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 GDAQ9Y2T3 454 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 TRPM7Q96QT4 1865 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 ASTN1O14525 1302 aa13.75□□□□□ -0.21
CBWD1-220ENST00000612045 PVALEFA0A1B0GWK0 134 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 ATP9AO75110 1047 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 RGS20O76081 388 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 SSBP05455 408 aaKnown RBP eCLIP13.74□□□□□ -0.21
CBWD1-220ENST00000612045 SLC12A3P55017 1021 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 CTTNQ14247 550 aaKnown RBP13.74□□□□□ -0.21
CBWD1-220ENST00000612045 KLHL10Q6JEL2 608 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 UNC13DQ70J99 1090 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 DYMQ7RTS9 669 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 GIMAP8Q8ND71 665 aaPredicted RBP13.74□□□□□ -0.21
CBWD1-220ENST00000612045 MED15Q96RN5 788 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 TRIM5Q9C035 493 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 MROH8Q9H579 483 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
CBWD1-220ENST00000612045 MUTP22033 750 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 ALDH5A1P51649 535 aaPredicted RBP13.74□□□□□ -0.21
CBWD1-220ENST00000612045 ZNF75DP51815 510 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 PDE4DQ08499 809 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 STXBP2Q15833 593 aa13.74□□□□□ -0.21
CBWD1-220ENST00000612045 MIER3Q7Z3K6 550 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms