RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PARVGQ9HBI0 331 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 GOLGA6AQ9NYA3 693 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 SUGT1Q9Y2Z0 365 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 PVALEFA0A1B0GWK0 134 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 IVLP07476 585 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 ASNSP08243 561 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 PSMC2P35998 433 aaKnown RBP14.41□□□□□ -0.1
TCF3-220ENST00000611869 MICALCLQ6ZW33 695 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 SFR1Q86XK3 245 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 CCDC170Q8IYT3 715 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 SYCE1Q8N0S2 351 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 SELENOSQ9BQE4 189 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 EPC1Q9H2F5 836 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 MAD2L2Q9UI95 211 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 GOLGA6L7A0A1B0GV03 622 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 STK4Q13043 487 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 PAK2Q13177 524 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 LONRF2Q1L5Z9 754 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 ANKRD40Q6AI12 368 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 DEPTORQ8TB45 409 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 CSADQ9Y600 493 aa14.41□□□□□ -0.1
TCF3-220ENST00000611869 A0A1B0GTH6 734 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 DCAF8L1A6NGE4 600 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 GAP43P17677 238 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 EN1Q05925 392 aaPredicted RBP14.4□□□□□ -0.1
TCF3-220ENST00000611869 TRPC3Q13507 836 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 WDR24Q96S15 920 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 USTQ9Y2C2 406 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 GRM1Q13255 1194 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 PKN1Q16512 942 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 EARS2Q5JPH6 523 aaKnown RBP14.4□□□□□ -0.1
TCF3-220ENST00000611869 NAA35Q5VZE5 725 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 ARHGAP27Q6ZUM4 889 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 GCNT4Q9P109 453 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 UTP11Q9Y3A2 253 aaKnown RBP14.4□□□□□ -0.1
TCF3-220ENST00000611869 LTN1O94822 1766 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 FTCDO95954 541 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 PPP1R18Q6NYC8 613 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 ADD3Q9UEY8 706 aaKnown RBP14.4□□□□□ -0.1
TCF3-220ENST00000611869 SLIT3O75094 1523 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 NEBLO76041 1014 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 LIG4P49917 911 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 FXR1P51114 621 aaKnown RBP eCLIP14.4□□□□□ -0.1
TCF3-220ENST00000611869 DMP1Q13316 513 aaPredicted RBP14.4□□□□□ -0.1
TCF3-220ENST00000611869 DNAI2Q9GZS0 605 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 ZMYND12Q9H0C1 365 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 SUGCTQ9HAC7 445 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 PDE11AQ9HCR9 933 aa14.4□□□□□ -0.1
TCF3-220ENST00000611869 GFPT2O94808 682 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 FAM160B2Q86V87 743 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 ADSSL1Q8N142 457 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 POMGNT1Q8WZA1 660 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 PCDHA13Q9Y5I0 950 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 LRRIQ4A6NIV6 560 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 HNRNPDLO14979 420 aaKnown RBP14.39□□□□□ -0.11
TCF3-220ENST00000611869 MYL7Q01449 175 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 KCNB1Q14721 858 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 ARFGAP2Q8N6H7 521 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 KRIT1O00522 736 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 CD19P15391 556 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 NFIAQ12857 509 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 STRIP1Q5VSL9 837 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 PAIP2Q9BPZ3 127 aaKnown RBP14.39□□□□□ -0.11
TCF3-220ENST00000611869 MLXIPQ9HAP2 919 aa14.39□□□□□ -0.11
TCF3-220ENST00000611869 ZBTB12Q9Y330 459 aaPredicted RBP14.39□□□□□ -0.11
TCF3-220ENST00000611869 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.39□□□□□ -0.11
TCF3-220ENST00000611869 EBAG9O00559 213 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 SRGAP2O75044 1071 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 NDUFB10O96000 172 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 MRPS25P82663 173 aaKnown RBP14.38□□□□□ -0.11
TCF3-220ENST00000611869 NR1I3Q14994 352 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 RASGRP2Q7LDG7 609 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 GUF1Q8N442 669 aaKnown RBP14.38□□□□□ -0.11
TCF3-220ENST00000611869 CHP1Q99653 195 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 LRRC53A6NM62 1247 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 GADL1Q6ZQY3 521 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 NCAPG2Q86XI2 1143 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 TC2NQ8N9U0 490 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 CERKQ8TCT0 537 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 A0A1W2PRG0 241 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 C2orf54Q08AI8 447 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 CEP170P1Q96L14 293 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 RTFDC1Q9BY42 306 aaPredicted RBP14.38□□□□□ -0.11
TCF3-220ENST00000611869 JMJD4Q9H9V9 463 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 SEPT9Q9UHD8 586 aaPredicted RBP14.38□□□□□ -0.11
TCF3-220ENST00000611869 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.38□□□□□ -0.114e-6■■■■□ 20.3
TCF3-220ENST00000611869 ZBTB7AO95365 584 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 KRT19P08727 400 aa14.38□□□□□ -0.11
TCF3-220ENST00000611869 ORC2Q13416 577 aaPredicted RBP14.38□□□□□ -0.11
TCF3-220ENST00000611869 SCAF8Q9UPN6 1271 aaKnown RBP14.38□□□□□ -0.11
TCF3-220ENST00000611869 PALM3A6NDB9 673 aaPredicted RBP14.37□□□□□ -0.11
TCF3-220ENST00000611869 POLGP54098 1239 aaPredicted RBP14.37□□□□□ -0.11
TCF3-220ENST00000611869 GUCY2DQ02846 1103 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 DALRD3Q5D0E6 543 aaKnown RBP14.37□□□□□ -0.11
TCF3-220ENST00000611869 CCDC105Q8IYK2 499 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 PDS5AQ29RF7 1337 aaKnown RBP14.37□□□□□ -0.11
TCF3-220ENST00000611869 FAM205AQ6ZU69 1335 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 HHIPL2Q6UWX4 724 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 LRRC45Q96CN5 670 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 FAM20AQ96MK3 541 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms