RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 MECOMQ03112 1051 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 KIAA0753Q2KHM9 967 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 GKAP1Q5VSY0 366 aaPredicted RBP12.11□□□□□ -0.47
CDH4-202ENST00000611855 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 ZSCAN29Q8IWY8 852 aaPredicted RBP12.11□□□□□ -0.47
CDH4-202ENST00000611855 NELFCDQ8IXH7 590 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 ZNF34Q8IZ26 560 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 CCSER1Q9C0I3 900 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 ATP6V0A4Q9HBG4 840 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 IL17RBQ9NRM6 502 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 TMEM260Q9NX78 707 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 UBR2Q8IWV8 1755 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 DUOX1Q9NRD9 1551 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 POTEMA6NI47 508 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 TLR2O60603 784 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 KIF4AO95239 1232 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 OR52Z1P0C646 297 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 FLT3P36888 993 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 IRX1P78414 480 aaPredicted RBP12.1□□□□□ -0.47
CDH4-202ENST00000611855 MAP2K1Q02750 393 aaPredicted RBP12.1□□□□□ -0.47
CDH4-202ENST00000611855 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 PARD3BQ8TEW8 1205 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 GDF3Q9NR23 364 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 SPATS2LQ9NUQ6 558 aaKnown RBP12.1□□□□□ -0.47
CDH4-202ENST00000611855 ZNF142P52746 1687 aaPredicted RBP12.1□□□□□ -0.47
CDH4-202ENST00000611855 AP1G2O75843 785 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 ATP6V1G2O95670 118 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 ERVK-9P63128 1117 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 ZKSCAN8Q15776 578 aaPredicted RBP12.1□□□□□ -0.47
CDH4-202ENST00000611855 AP1ARQ63HQ0 302 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 PDXDC1Q6P996 788 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 FAM133AQ8N9E0 248 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 RAPGEF5Q92565 580 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 NUDT12Q9BQG2 462 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 PLCD4Q9BRC7 762 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 FAM167BQ9BTA0 163 aa12.1□□□□□ -0.47
CDH4-202ENST00000611855 LSM14BQ9BX40 385 aaKnown RBP12.1□□□□□ -0.47
CDH4-202ENST00000611855 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDH4-202ENST00000611855 A0A087X0T9 212 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 A0A1W2PQJ5 194 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 RTN2O75298 545 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 FAM228BP0C875 321 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 MAGOHP61326 146 aaKnown RBP12.09□□□□□ -0.47
CDH4-202ENST00000611855 MAN2A1Q16706 1144 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 MAEAQ7L5Y9 396 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 MAGOHBQ96A72 148 aaKnown RBP12.09□□□□□ -0.47
CDH4-202ENST00000611855 MMTAG2Q9BU76 263 aaKnown RBP12.09□□□□□ -0.47
CDH4-202ENST00000611855 BRIP1Q9BX63 1249 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 DDX47Q9H0S4 455 aaKnown RBP12.09□□□□□ -0.47
CDH4-202ENST00000611855 NEUROG2Q9H2A3 272 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 CNOT8Q9UFF9 292 aaKnown RBP12.09□□□□□ -0.47
CDH4-202ENST00000611855 SLIT2O94813 1529 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 TRAF5O00463 557 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 CEP104O60308 925 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 ELF3P78545 371 aaPredicted RBP12.09□□□□□ -0.47
CDH4-202ENST00000611855 KCNMA1Q12791 1236 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 KRT71Q3SY84 523 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 HGSNATQ68CP4 663 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 CNNM4Q6P4Q7 775 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 SLC51AQ86UW1 340 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 CCDC63Q8NA47 563 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 BCORQ6W2J9 1755 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 CICQ96RK0 1608 aaPredicted RBP12.09□□□□□ -0.47
CDH4-202ENST00000611855 ANP32DO95626 131 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 PRLRP16471 622 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 HSD17B3P37058 310 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 CDK17Q00537 523 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 DRP2Q13474 957 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 GLE1Q53GS7 698 aaKnown RBP12.09□□□□□ -0.47
CDH4-202ENST00000611855 ADAT2Q7Z6V5 191 aaKnown RBP12.09□□□□□ -0.47
CDH4-202ENST00000611855 ZNF483Q8TF39 744 aaPredicted RBP12.09□□□□□ -0.47
CDH4-202ENST00000611855 CDK5RAP3Q96JB5 506 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 MKNK2Q9HBH9 465 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 SAP30BPQ9UHR5 308 aaKnown RBP12.09□□□□□ -0.47
CDH4-202ENST00000611855 TAF1P21675 1872 aa12.09□□□□□ -0.47
CDH4-202ENST00000611855 COL4A1P02462 1669 aa12.08□□□□□ -0.47
CDH4-202ENST00000611855 TLDC2A0PJX2 215 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 PPP4R3AQ6IN85 833 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 TLDC1Q6P9B6 456 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 SV2BQ7L1I2 683 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 ZNF572Q7Z3I7 529 aaPredicted RBP12.08□□□□□ -0.48
CDH4-202ENST00000611855 KCNK18Q7Z418 384 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 CUL5Q93034 780 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 SELENOSQ9BQE4 189 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 DPH5Q9H2P9 285 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 ZHX3Q9H4I2 956 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 TMBIM4Q9HC24 238 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 SLAIN2Q9P270 581 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 STXBP3O00186 592 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 DIAPH2O60879 1101 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 ITIH3Q06033 890 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 IFFO1Q0D2I5 559 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 CDC37Q16543 378 aaPredicted RBP12.08□□□□□ -0.48
CDH4-202ENST00000611855 SLC9C1Q4G0N8 1177 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 CAVIN4Q5BKX8 364 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 FAM83BQ5T0W9 1011 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 SFMBT2Q5VUG0 894 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms