RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 PLA2G4BP0C869 781 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 MAGEA1P43355 309 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 CDC37Q16543 378 aaPredicted RBP19.06■□□□□ 0.64
NEK3-206ENST00000611833 SLFN13Q68D06 897 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 SIAH1Q8IUQ4 282 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 BAP1Q92560 729 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 AKT1S1Q96B36 256 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 ALS2CR12Q96Q35 445 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 ANO3Q9BYT9 981 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 KANSL2Q9H9L4 492 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 PI4KBQ9UBF8 816 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 LRRIQ3A6PVS8 624 aaPredicted RBP19.05■□□□□ 0.64
NEK3-206ENST00000611833 PDE2AO00408 941 aaPredicted RBP19.05■□□□□ 0.64
NEK3-206ENST00000611833 LCA5LO95447 670 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 TNNT3P45378 269 aaPredicted RBP19.05■□□□□ 0.64
NEK3-206ENST00000611833 ZCWPW2Q504Y3 356 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 PDXDC1Q6P996 788 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 NELFCDQ8IXH7 590 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 DCAF4Q8WV16 495 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 ZNF622Q969S3 477 aaKnown RBP eCLIP19.05■□□□□ 0.64
NEK3-206ENST00000611833 FGFBP2Q9BYJ0 223 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 EDEM3Q9BZQ6 932 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 KCNMB3Q9NPA1 279 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 SNX12Q9UMY4 172 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 CAPN6Q9Y6Q1 641 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 SCN9AQ15858 1988 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 KRT18P05783 430 aaKnown RBP19.05■□□□□ 0.64
NEK3-206ENST00000611833 LMAN1P49257 510 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 RBM5P52756 815 aaKnown RBP eCLIP19.05■□□□□ 0.64
NEK3-206ENST00000611833 HERC4Q5GLZ8 1057 aaPredicted RBP19.05■□□□□ 0.64
NEK3-206ENST00000611833 CCDC70Q6NSX1 233 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 GPBP1Q86WP2 473 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 IDI2Q9BXS1 227 aa19.05■□□□□ 0.64
NEK3-206ENST00000611833 POTEB3A0JP26 581 aa19.04■□□□□ 0.64
NEK3-206ENST00000611833 POTECB2RU33 542 aa19.04■□□□□ 0.64
NEK3-206ENST00000611833 MEIS2O14770 477 aa19.04■□□□□ 0.64
NEK3-206ENST00000611833 USP11P51784 963 aa19.04■□□□□ 0.64
NEK3-206ENST00000611833 CACNB1Q02641 598 aaPredicted RBP19.04■□□□□ 0.64
NEK3-206ENST00000611833 C2orf54Q08AI8 447 aa19.04■□□□□ 0.64
NEK3-206ENST00000611833 RAD51AP2Q09MP3 1159 aa19.04■□□□□ 0.64
NEK3-206ENST00000611833 KCNMA1Q12791 1236 aa19.04■□□□□ 0.64
NEK3-206ENST00000611833 DACT2Q5SW24 774 aa19.04■□□□□ 0.64
NEK3-206ENST00000611833 POTEBQ6S5H4 581 aa19.04■□□□□ 0.64
NEK3-206ENST00000611833 P2RX7Q99572 595 aaKnown RBP19.04■□□□□ 0.64
NEK3-206ENST00000611833 NLRC4Q9NPP4 1024 aa19.04■□□□□ 0.64
NEK3-206ENST00000611833 NPHP3-ACAD11A0A0J9YXS1 232 aa19.03■□□□□ 0.64
NEK3-206ENST00000611833 ZMYND10O75800 440 aa19.03■□□□□ 0.64
NEK3-206ENST00000611833 GNA14O95837 355 aa19.03■□□□□ 0.64
NEK3-206ENST00000611833 TDRD12Q587J7 1177 aaKnown RBP19.03■□□□□ 0.64
NEK3-206ENST00000611833 STRIP1Q5VSL9 837 aa19.03■□□□□ 0.64
NEK3-206ENST00000611833 TATDN1Q6P1N9 297 aa19.03■□□□□ 0.64
NEK3-206ENST00000611833 CEP63Q96MT8 703 aa19.03■□□□□ 0.64
NEK3-206ENST00000611833 MRIQ9BWK5 157 aa19.03■□□□□ 0.64
NEK3-206ENST00000611833 TRIM34Q9BYJ4 488 aa19.03■□□□□ 0.64
NEK3-206ENST00000611833 ZHX3Q9H4I2 956 aa19.03■□□□□ 0.64
NEK3-206ENST00000611833 FAN1Q9Y2M0 1017 aa19.03■□□□□ 0.64
NEK3-206ENST00000611833 GOLGB1Q14789 3259 aaKnown RBP19.03■□□□□ 0.64
NEK3-206ENST00000611833 HNRNPH2P55795 449 aaKnown RBP19.03■□□□□ 0.64
NEK3-206ENST00000611833 GFPT1Q06210 699 aaPredicted RBP19.03■□□□□ 0.64
NEK3-206ENST00000611833 PSD3Q9NYI0 1048 aa19.03■□□□□ 0.64
NEK3-206ENST00000611833 CYP3A7-CYP3A51PA0A087WV96 503 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 CYP3A7P24462 503 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 STAT3P40763 770 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 SNAP25P60880 206 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 ICA1Q05084 483 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 SLC9C1Q4G0N8 1177 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 CREG2Q8IUH2 290 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 SLFN12Q8IYM2 578 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 FAM71BQ8TC56 605 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 MBOAT7Q96N66 472 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 NUCKS1Q9H1E3 243 aaKnown RBP19.02■□□□□ 0.64
NEK3-206ENST00000611833 CEP72Q9P209 647 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 PCDHA2Q9Y5H9 948 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.02■□□□□ 0.64
NEK3-206ENST00000611833 ZNF646O15015 1829 aaPredicted RBP19.02■□□□□ 0.64
NEK3-206ENST00000611833 SSU72P8A0A1W2PR75 194 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 ECE2O60344 883 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 GDF11O95390 407 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 SFMBT2Q5VUG0 894 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 MSL1Q68DK7 614 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 ANKRD13CQ8N6S4 541 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 CRYGNQ8WXF5 182 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 LSM14BQ9BX40 385 aaKnown RBP19.02■□□□□ 0.64
NEK3-206ENST00000611833 VIPAS39Q9H9C1 493 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 MED4Q9NPJ6 270 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 EMILIN3Q9NT22 766 aa19.02■□□□□ 0.64
NEK3-206ENST00000611833 F5H6K3 240 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 PHACTR2O75167 634 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 MED24O75448 989 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 PRLRP16471 622 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 CYP11B2P19099 503 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 NAP1L1P55209 391 aaKnown RBP19.01■□□□□ 0.63
NEK3-206ENST00000611833 RASSF7Q02833 373 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 KLRC3Q07444 240 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 MAPK8IP2Q13387 824 aaPredicted RBP19.01■□□□□ 0.63
NEK3-206ENST00000611833 FAM83BQ5T0W9 1011 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 ARHGAP27Q6ZUM4 889 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 COG1Q8WTW3 980 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 SLC26A4O43511 780 aa19.01■□□□□ 0.63
NEK3-206ENST00000611833 EPS15P42566 896 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms