RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 FAN1Q9Y2M0 1017 aa7□□□□□ -1.29
SNX13-213ENST00000611725 PCDHA13Q9Y5I0 950 aa7□□□□□ -1.29
SNX13-213ENST00000611725 KCNK3O14649 394 aa7□□□□□ -1.29
SNX13-213ENST00000611725 BACH1O14867 736 aa7□□□□□ -1.29
SNX13-213ENST00000611725 SLC37A4O43826 429 aa7□□□□□ -1.29
SNX13-213ENST00000611725 PRPF6O94906 941 aaKnown RBP7□□□□□ -1.29
SNX13-213ENST00000611725 AFPP02771 609 aaKnown RBP7□□□□□ -1.29
SNX13-213ENST00000611725 ALAS1P13196 640 aa7□□□□□ -1.29
SNX13-213ENST00000611725 GOLGA5Q8TBA6 731 aa7□□□□□ -1.29
SNX13-213ENST00000611725 FAM71BQ8TC56 605 aa7□□□□□ -1.29
SNX13-213ENST00000611725 MTRQ99707 1265 aa7□□□□□ -1.29
SNX13-213ENST00000611725 NALCNQ8IZF0 1738 aa7□□□□□ -1.29
SNX13-213ENST00000611725 GAP43P17677 238 aa7□□□□□ -1.29
SNX13-213ENST00000611725 ABCB4P21439 1286 aa7□□□□□ -1.29
SNX13-213ENST00000611725 TM4SF1P30408 202 aa7□□□□□ -1.29
SNX13-213ENST00000611725 DDR1Q08345 913 aa7□□□□□ -1.29
SNX13-213ENST00000611725 CCDC93Q567U6 631 aa7□□□□□ -1.29
SNX13-213ENST00000611725 RNF10Q8N5U6 811 aaKnown RBP7□□□□□ -1.29
SNX13-213ENST00000611725 CERKQ8TCT0 537 aa7□□□□□ -1.29
SNX13-213ENST00000611725 BICD1Q96G01 975 aa7□□□□□ -1.29
SNX13-213ENST00000611725 ZFP91Q96JP5 570 aaPredicted RBP7□□□□□ -1.29
SNX13-213ENST00000611725 NACC1Q96RE7 527 aa7□□□□□ -1.29
SNX13-213ENST00000611725 TAOK3Q9H2K8 898 aa7□□□□□ -1.29
SNX13-213ENST00000611725 PLEKHA4Q9H4M7 779 aa7□□□□□ -1.29
SNX13-213ENST00000611725 PODXL2Q9NZ53 605 aa7□□□□□ -1.29
SNX13-213ENST00000611725 CEP72Q9P209 647 aa7□□□□□ -1.29
SNX13-213ENST00000611725 SSU72P8A0A1W2PR75 194 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 RAD17O75943 681 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 FTCDO95954 541 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 ATP1A1P05023 1023 aaKnown RBP6.99□□□□□ -1.29
SNX13-213ENST00000611725 CXCR5P32302 372 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 SMTNP53814 917 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 PMS1P54277 932 aaKnown RBP6.99□□□□□ -1.29
SNX13-213ENST00000611725 ARHGAP44Q17R89 818 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 STRIP1Q5VSL9 837 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 TAX1BP1Q86VP1 789 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 ATRIPQ8WXE1 791 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 TCHPQ9BT92 498 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 ABCC6O95255 1503 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 NID2Q14112 1375 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 GAKO14976 1311 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 HEXIM1O94992 359 aaKnown RBP6.99□□□□□ -1.29
SNX13-213ENST00000611725 ZRANB2O95218 330 aaKnown RBP eCLIP6.99□□□□□ -1.29
SNX13-213ENST00000611725 USP14P54578 494 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 KCNH2Q12809 1159 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 TNFAIP1Q13829 316 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 EDRF1Q3B7T1 1238 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 IWS1Q96ST2 819 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 MLXIPQ9HAP2 919 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 BLOC1S4Q9NUP1 217 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 MKRN1Q9UHC7 482 aaKnown RBP6.99□□□□□ -1.29
SNX13-213ENST00000611725 KIF1AQ12756 1690 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 ZEB2O60315 1214 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 MOCS3O95396 460 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 TBC1D8O95759 1140 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 PTPROQ16827 1216 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 NIM1KQ8IY84 436 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 CCDC169A6NNP5 214 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 CLIC2O15247 247 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 STAT2P52630 851 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 GUCY2DQ02846 1103 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 PDXDC1Q6P996 788 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 IRF2BP1Q8IU81 584 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 PARVGQ9HBI0 331 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 ST7Q9NRC1 585 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 DISP2A7MBM2 1401 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 TBX3O15119 743 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 RDXP35241 583 aaKnown RBP6.99□□□□□ -1.29
SNX13-213ENST00000611725 STAT3P40763 770 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 SNAP25P60880 206 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 TEKT3Q9BXF9 490 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 TRIM31Q9BZY9 425 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 GOPCQ9HD26 462 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 STIM2Q9P246 746 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 TRIM10Q9UDY6 481 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 FHOD1Q9Y613 1164 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 LRRC37A3O60309 1634 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 ABCB11O95342 1321 aa6.99□□□□□ -1.29
SNX13-213ENST00000611725 GSTTP1A0A1W2PQM5 241 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 KLRC4O43908 158 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 SERPING1P05155 500 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 MYCLP12524 364 aaPredicted RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 CTTNQ14247 550 aaKnown RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 CRY2Q49AN0 593 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 EMBQ6PCB8 327 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 SYCE1Q8N0S2 351 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 CCDC26Q8TAB7 109 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 NAP1L3Q99457 506 aaPredicted RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 FAM204AQ9H8W3 233 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 NDUFAB1O14561 156 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 ECE2O60344 883 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 ENTPD3O75355 529 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 NR3C1P04150 777 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 BCRP11274 1271 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 FERP16591 822 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 PBX1P40424 430 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 PIGOQ8TEQ8 1089 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 DUSP9Q99956 384 aaKnown RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 DDX4Q9NQI0 724 aaKnown RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 PDXKO00764 312 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms