RNA–Protein interactions for RNA: ENST00000610292.4

TP53-218, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,639 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-218ENST00000610292 SH2D3CQ8N5H7 860 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 RNF10Q8N5U6 811 aaKnown RBP13.09□□□□□ -0.31
TP53-218ENST00000610292 TBC1D5Q92609 795 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 RUBCNQ92622 972 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 DNAJC19Q96DA6 116 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 ZIM3Q96PE6 472 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 EPB41L5Q9HCM4 733 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 ROBO1Q9Y6N7 1651 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 GRIN2DO15399 1336 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 CNTNAP4Q9C0A0 1308 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 RPS6KA4O75676 772 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 KRT14P02533 472 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 KLRC1P26715 233 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 SMARCA1P28370 1054 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
TP53-218ENST00000610292 GUCY2DQ02846 1103 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 PSMD2Q13200 908 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 TMEM119Q4V9L6 283 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 ALS2CLQ60I27 953 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 PPM1EQ8WY54 764 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.09□□□□□ -0.31
TP53-218ENST00000610292 PANK4Q9NVE7 773 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 CEP72Q9P209 647 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 MYH10P35580 1976 aa13.09□□□□□ -0.31
TP53-218ENST00000610292 GPR75-ASB3A0A0A6YYF3 556 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 KDM4FA0A1W2PPD8 638 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 EIF3HO15372 352 aaKnown RBP eCLIP13.08□□□□□ -0.32
TP53-218ENST00000610292 MARCH6O60337 910 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 SERPING1P05155 500 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 ZCWPW2Q504Y3 356 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 FAM26FQ5R3K3 315 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 CAVIN3Q969G5 261 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 PACSIN1Q9BY11 444 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 EDEM3Q9BZQ6 932 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 NPHP3-ACAD11A0A0J9YXS1 232 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 RBAK-RBAKDNI3L0D1 243 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 HEXIM1O94992 359 aaKnown RBP13.08□□□□□ -0.32
TP53-218ENST00000610292 ATP1A2P50993 1020 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 GUCY2FP51841 1108 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 GRAPQ13588 217 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 RAPGEF1Q13905 1077 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 TRADDQ15628 312 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 IFT20Q8IY31 132 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 GRAPLQ8TC17 118 aaPredicted RBP13.08□□□□□ -0.32
TP53-218ENST00000610292 HAS1Q92839 578 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 FAM212AQ96EL1 285 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 CCDC43Q96MW1 224 aaKnown RBP13.08□□□□□ -0.32
TP53-218ENST00000610292 KRT12Q99456 494 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 SAMM50Q9Y512 469 aa13.08□□□□□ -0.32
TP53-218ENST00000610292 COL5A3P25940 1745 aaPredicted RBP13.07□□□□□ -0.32
TP53-218ENST00000610292 A0A087X0T9 212 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 E9PMD0 336 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 EBAG9O00559 213 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 FAM228BP0C875 321 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 EPB41P11171 864 aaKnown RBP13.07□□□□□ -0.32
TP53-218ENST00000610292 RHBDL3P58872 404 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 PDCLQ13371 301 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 NAB2Q15742 525 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 FAM98CQ17RN3 349 aaKnown RBP13.07□□□□□ -0.32
TP53-218ENST00000610292 GBP6Q6ZN66 633 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
TP53-218ENST00000610292 LRRC27Q9C0I9 530 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 CD209Q9NNX6 404 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 ADAMTS1Q9UHI8 967 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 DDX25Q9UHL0 483 aaKnown RBP13.07□□□□□ -0.32
TP53-218ENST00000610292 ATP6V0A2Q9Y487 856 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 PPP1R11O60927 126 aaPredicted RBP13.07□□□□□ -0.32
TP53-218ENST00000610292 TNFRSF8P28908 595 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 GPSM2P81274 684 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 NNTQ13423 1086 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 KIAA0753Q2KHM9 967 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 GLE1Q53GS7 698 aaKnown RBP13.07□□□□□ -0.32
TP53-218ENST00000610292 MICALL1Q8N3F8 863 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 FAM133AQ8N9E0 248 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 EFCC1Q9HA90 598 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 GDF3Q9NR23 364 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 MTMR4Q9NYA4 1195 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 TSKSQ9UJT2 592 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.07□□□□□ -0.32
TP53-218ENST00000610292 FAM169AQ9Y6X4 670 aa13.07□□□□□ -0.32
TP53-218ENST00000610292 PICALMQ13492 652 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 CFAP58Q5T655 872 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 TTBK2Q6IQ55 1244 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 TADA2BQ86TJ2 420 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 PCDHA12Q9UN75 941 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 SHTN1A0MZ66 631 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 ZNF233A6NK53 670 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 UFL1O94874 794 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 AKR1B1P15121 316 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 SLC16A2P36021 539 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 LIG3P49916 1009 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 KLHL30Q0D2K2 578 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 SLC18A3Q16572 532 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 DNAAF5Q86Y56 855 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 SYN2Q92777 582 aaPredicted RBP13.06□□□□□ -0.32
TP53-218ENST00000610292 ZHX3Q9H4I2 956 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 JMJD4Q9H9V9 463 aa13.06□□□□□ -0.32
TP53-218ENST00000610292 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
TP53-218ENST00000610292 KIAA1024Q9UPX6 916 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms