RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 NDST4Q9H3R1 872 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 MRPL44Q9H9J2 332 aaKnown RBP13.27□□□□□ -0.29
USP6NL-206ENST00000609853 VAV3Q9UKW4 847 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 EPN1Q9Y6I3 576 aaPredicted RBP13.27□□□□□ -0.29
USP6NL-206ENST00000609853 LOXHD1Q8IVV2 1947 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 SSBP05455 408 aaKnown RBP eCLIP13.26□□□□□ -0.29
USP6NL-206ENST00000609853 KRT18P05783 430 aaKnown RBP13.26□□□□□ -0.29
USP6NL-206ENST00000609853 HOXA13P31271 388 aaPredicted RBP13.26□□□□□ -0.29
USP6NL-206ENST00000609853 TUBB4BP68371 445 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 KRT83P78385 493 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 MAP3K9P80192 1104 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 SETQ01105 290 aaPredicted RBP13.26□□□□□ -0.29
USP6NL-206ENST00000609853 ZCWPW2Q504Y3 356 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 ARHGAP29Q52LW3 1261 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 KIAA1755Q5JYT7 1200 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 NCAPH2Q6IBW4 605 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 LRRC55Q6ZSA7 311 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 GJA10Q969M2 543 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 KIFC2Q96AC6 838 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 TUFT1Q9NNX1 390 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 PCDHA2Q9Y5H9 948 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 SMCHD1A6NHR9 2005 aa13.26□□□□□ -0.29
USP6NL-206ENST00000609853 IGLV3-22A0A075B6J6 115 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 RNF225M0QZC1 329 aaPredicted RBP13.25□□□□□ -0.29
USP6NL-206ENST00000609853 WDR46O15213 610 aaKnown RBP13.25□□□□□ -0.29
USP6NL-206ENST00000609853 NDUFA10O95299 355 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 CFBP00751 764 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 SPATA31C1P0DKV0 1188 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 CYLC1P35663 651 aaPredicted RBP13.25□□□□□ -0.29
USP6NL-206ENST00000609853 PTGER2P43116 358 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 MARSP56192 900 aaKnown RBP13.25□□□□□ -0.29
USP6NL-206ENST00000609853 EDRF1Q3B7T1 1238 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 HERC4Q5GLZ8 1057 aaPredicted RBP13.25□□□□□ -0.29
USP6NL-206ENST00000609853 MIGA2Q7L4E1 593 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 KRT26Q7Z3Y9 468 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 MNS1Q8NEH6 495 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 MAP3K20Q9NYL2 800 aaKnown RBP13.25□□□□□ -0.29
USP6NL-206ENST00000609853 COL4A3BPQ9Y5P4 624 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 LTBP3Q9NS15 1303 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 PHF20L1A8MW92 1017 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 EFCAB8A8MWE9 144 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 IPO7O95373 1038 aaKnown RBP13.25□□□□□ -0.29
USP6NL-206ENST00000609853 EYA4O95677 639 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 ICAM1P05362 532 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 HNRNPH3P31942 346 aaKnown RBP13.25□□□□□ -0.29
USP6NL-206ENST00000609853 STAT3P40763 770 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 PPP2R5CQ13362 524 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 NBPF9Q3BBW0 867 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 CEP55Q53EZ4 464 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 ZC3H3Q8IXZ2 948 aaKnown RBP13.25□□□□□ -0.29
USP6NL-206ENST00000609853 PRPF38AQ8NAV1 312 aaKnown RBP13.25□□□□□ -0.29
USP6NL-206ENST00000609853 SLC5A5Q92911 643 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 PCMTD1Q96MG8 357 aaPredicted RBP13.25□□□□□ -0.29
USP6NL-206ENST00000609853 WDR24Q96S15 920 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 WDR11Q9BZH6 1224 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 MTFR1LQ9H019 292 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 EMILIN3Q9NT22 766 aa13.25□□□□□ -0.29
USP6NL-206ENST00000609853 POTEFA5A3E0 1075 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 CTNND1O60716 968 aaKnown RBP13.24□□□□□ -0.29
USP6NL-206ENST00000609853 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 FDX1P10109 184 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 GAP43P17677 238 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 GHRHRQ02643 423 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 RASA3Q14644 834 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 ARSHQ5FYA8 562 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 CCDC174Q6PII3 467 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 POTEGQ6S5H5 508 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 POTEEQ6S8J3 1075 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 OTOP1Q7RTM1 612 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 LDHDQ86WU2 507 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 MCF2L2Q86YR7 1114 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 EHBP1Q8NDI1 1231 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 HOOK2Q96ED9 719 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 FEZ1Q99689 392 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 EIF2AK1Q9BQI3 630 aaKnown RBP13.24□□□□□ -0.29
USP6NL-206ENST00000609853 CCDC94Q9BW85 323 aaPredicted RBP13.24□□□□□ -0.29
USP6NL-206ENST00000609853 KIAA1683Q9H0B3 1180 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 NUCKS1Q9H1E3 243 aaKnown RBP13.24□□□□□ -0.29
USP6NL-206ENST00000609853 HAUS4Q9H6D7 363 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 LZTFL1Q9NQ48 299 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 FAM184BQ9ULE4 1060 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 MRFAP1Q9Y605 127 aa13.24□□□□□ -0.29
USP6NL-206ENST00000609853 TRAF5O00463 557 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 MEIS1O00470 390 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 PSMD10O75832 226 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 HSD17B4P51659 736 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 PPP2R3AQ06190 1150 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 GIT2Q14161 759 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 LRCH2Q5VUJ6 765 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 WDR59Q6PJI9 974 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 NIPA1Q7RTP0 329 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 UBXN4Q92575 508 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 HSD17B14Q9BPX1 270 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 KCND2Q9NZV8 630 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 PLAGL2Q9UPG8 496 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 SIK3Q9Y2K2 1263 aa13.23□□□□□ -0.29
USP6NL-206ENST00000609853 CTAGE9A4FU28 777 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 RASSF10A6NK89 507 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 EIF3CLB5ME19 914 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms