RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SPA17Q15506 151 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 MUM1Q2TAK8 710 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 SPATA31D4Q6ZUB0 917 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 RNF10Q8N5U6 811 aaKnown RBP13.73□□□□□ -0.21
CTCFL-218ENST00000608440 C17orf50Q8WW18 174 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 IFT43Q96FT9 208 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 GBP5Q96PP8 586 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 TRAPPC9Q96Q05 1148 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 RAB17Q9H0T7 212 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 CWC25Q9NXE8 425 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-218ENST00000608440 CHPF2Q9P2E5 772 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 FBXL5Q9UKA1 691 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 RFX7Q2KHR2 1363 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 USO1O60763 962 aaKnown RBP13.73□□□□□ -0.21
CTCFL-218ENST00000608440 FLT3P36888 993 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 CCNFP41002 786 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 KLK7P49862 253 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 KBTBD12Q3ZCT8 623 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 RRAGBQ5VZM2 374 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 PRMT1Q99873 361 aaKnown RBP13.73□□□□□ -0.21
CTCFL-218ENST00000608440 ARHGEF3Q9NR81 526 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 SIPA1L3O60292 1781 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-218ENST00000608440 PALM3A6NDB9 673 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-218ENST00000608440 TRIM21P19474 475 aaKnown RBP13.72□□□□□ -0.21
CTCFL-218ENST00000608440 CABP4P57796 275 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 TSNAXIP1Q2TAA8 658 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 ZNF790Q6PG37 636 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 TMEM110Q86TL2 294 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 SPATA20Q8TB22 786 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 SNRNP27Q8WVK2 155 aaKnown RBP13.72□□□□□ -0.21
CTCFL-218ENST00000608440 ABTB1Q969K4 478 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-218ENST00000608440 EEF2KMTQ96G04 330 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 DDX27Q96GQ7 796 aaKnown RBP13.72□□□□□ -0.21
CTCFL-218ENST00000608440 PCMTD1Q96MG8 357 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-218ENST00000608440 ANKRD27Q96NW4 1050 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 CARD9Q9H257 536 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.72□□□□□ -0.217e-7■■■■■ 79
CTCFL-218ENST00000608440 MRC1P22897 1456 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 CALB2P22676 271 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 CACNA2D1P54289 1103 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 DHX9Q08211 1270 aaKnown RBP13.72□□□□□ -0.21
CTCFL-218ENST00000608440 RCN2Q14257 317 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 ZC2HC1CQ53FD0 456 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-218ENST00000608440 HOOK3Q86VS8 718 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 IFT74Q96LB3 600 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 CCDC42Q96M95 316 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 LBHD1Q9BQE6 289 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-218ENST00000608440 IFIH1Q9BYX4 1025 aaKnown RBP13.72□□□□□ -0.21
CTCFL-218ENST00000608440 RNPEPL1Q9HAU8 725 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 SUN2Q9UH99 717 aa13.72□□□□□ -0.21
CTCFL-218ENST00000608440 SMIM23A6NLE4 172 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 GNA14O95837 355 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 PRLRP16471 622 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 AGBL2Q5U5Z8 902 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 MB21D1Q8N884 522 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 SLC35B4Q969S0 331 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 TLR10Q9BXR5 811 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 BLZF1Q9H2G9 400 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 VCX3BQ9H321 246 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 SH2D4AQ9H788 454 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 VCX3AQ9NNX9 186 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 TSKSQ9UJT2 592 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 FBXO2Q9UK22 296 aaPredicted RBP13.71□□□□□ -0.21
CTCFL-218ENST00000608440 TMCO1Q9UM00 188 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 CAPN11Q9UMQ6 739 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 A0A087X0B3 334 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 SART1O43290 800 aaKnown RBP13.71□□□□□ -0.21
CTCFL-218ENST00000608440 HNRNPCP07910 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
CTCFL-218ENST00000608440 HOXB7P09629 217 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 KCNA3P22001 575 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 PTDSS1P48651 473 aaKnown RBP13.71□□□□□ -0.21
CTCFL-218ENST00000608440 ERVK-9P63128 1117 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 KANK3Q6NY19 840 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 PI16Q6UXB8 463 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 ZNF662Q6ZS27 426 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 MKL1Q969V6 931 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 DDX50Q9BQ39 737 aaKnown RBP13.71□□□□□ -0.21
CTCFL-218ENST00000608440 CSRNP2Q9H175 543 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 NEUROG2Q9H2A3 272 aa13.71□□□□□ -0.21
CTCFL-218ENST00000608440 TLDC2A0PJX2 215 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PRC1O43663 620 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PENKP01210 267 aaPredicted RBP13.7□□□□□ -0.22
CTCFL-218ENST00000608440 VIL1P09327 827 aaKnown RBP13.7□□□□□ -0.22
CTCFL-218ENST00000608440 TPBGLP0DKB5 382 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 BNIP1Q12981 228 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PABPC4Q13310 644 aaKnown RBP eCLIP13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PLS1Q14651 629 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 SUPT20HQ8NEM7 779 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 IWS1Q96ST2 819 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 ETNK2Q9NVF9 386 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 SALL4Q9UJQ4 1053 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PLCH1Q4KWH8 1693 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 TMCC1O94876 653 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 ACADSP16219 412 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 ZNF131P52739 623 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 CWF19L2Q2TBE0 894 aaKnown RBP13.7□□□□□ -0.22
CTCFL-218ENST00000608440 CNPY1Q3B7I2 92 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 TYW1BQ6NUM6 668 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 ZNF365Q70YC5 407 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 LRRC45Q96CN5 670 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms