RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 LCHNA4D1U4 455 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 ATP2A1O14983 1001 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 ZEB2O60315 1214 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 PTGS1P23219 599 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 RFC2P35250 354 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 PDE1AP54750 535 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 TLK2Q86UE8 772 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 PLEKHM2Q8IWE5 1019 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 KDF1Q8NAX2 398 aaPredicted RBP14.46□□□□□ -0.09
HLA-F-230ENST00000606273 RNF217Q8TC41 542 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 GDPD5Q8WTR4 605 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 CCDC17Q96LX7 622 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 SLF1Q9BQI6 1058 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 KANSL2Q9H9L4 492 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 DCP1AQ9NPI6 582 aaPredicted RBP14.46□□□□□ -0.09
HLA-F-230ENST00000606273 PAG1Q9NWQ8 432 aa14.46□□□□□ -0.09
HLA-F-230ENST00000606273 TTC41PQ6P2S7 1318 aa14.45□□□□□ -0.1
HLA-F-230ENST00000606273 MYH1P12882 1939 aa14.45□□□□□ -0.1
HLA-F-230ENST00000606273 IQCF3P0C7M6 154 aa14.45□□□□□ -0.1
HLA-F-230ENST00000606273 KRT76Q01546 638 aa14.45□□□□□ -0.1
HLA-F-230ENST00000606273 CPXCR1Q8N123 301 aa14.45□□□□□ -0.1
HLA-F-230ENST00000606273 NEK9Q8TD19 979 aa14.45□□□□□ -0.1
HLA-F-230ENST00000606273 SDR42E1Q8WUS8 393 aa14.45□□□□□ -0.1
HLA-F-230ENST00000606273 CRNKL1Q9BZJ0 848 aaKnown RBP14.45□□□□□ -0.1
HLA-F-230ENST00000606273 FTOQ9C0B1 505 aaKnown RBP eCLIP14.45□□□□□ -0.1
HLA-F-230ENST00000606273 PCDHB9Q9Y5E1 797 aa14.45□□□□□ -0.1
HLA-F-230ENST00000606273 TNKSO95271 1327 aa14.44□□□□□ -0.1
HLA-F-230ENST00000606273 RAD21O60216 631 aa14.44□□□□□ -0.1
HLA-F-230ENST00000606273 FBXO45P0C2W1 286 aa14.44□□□□□ -0.1
HLA-F-230ENST00000606273 PTGIRP43119 386 aa14.44□□□□□ -0.1
HLA-F-230ENST00000606273 TMEM63BQ5T3F8 832 aa14.44□□□□□ -0.1
HLA-F-230ENST00000606273 PRPF38AQ8NAV1 312 aaKnown RBP14.44□□□□□ -0.1
HLA-F-230ENST00000606273 NANOS1Q8WY41 292 aaKnown RBP14.44□□□□□ -0.1
HLA-F-230ENST00000606273 CYLDQ9NQC7 956 aa14.44□□□□□ -0.1
HLA-F-230ENST00000606273 Q9Y3F1 56 aa14.44□□□□□ -0.1
HLA-F-230ENST00000606273 USP34Q70CQ2 3546 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 CDK8P49336 464 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 ERVK-21P61565 698 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 CNTN2Q02246 1040 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 ZP2Q05996 745 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 IQSEC1Q6DN90 963 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 TMCO2Q7Z6W1 182 aaPredicted RBP14.43□□□□□ -0.1
HLA-F-230ENST00000606273 FAM133AQ8N9E0 248 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 CHST13Q8NET6 341 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 PRSS33Q8NF86 280 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 GPATCH3Q96I76 525 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 NUP88Q99567 741 aaPredicted RBP14.43□□□□□ -0.1
HLA-F-230ENST00000606273 RAVER2Q9HCJ3 691 aaKnown RBP14.43□□□□□ -0.1
HLA-F-230ENST00000606273 PDGFCQ9NRA1 345 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 FBXO40Q9UH90 709 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 MTUS1Q9ULD2 1270 aa14.43□□□□□ -0.1
HLA-F-230ENST00000606273 TCRBV5S4A2TA0A5A2 114 aa14.42□□□□□ -0.1
HLA-F-230ENST00000606273 ZBED4O75132 1171 aa14.42□□□□□ -0.1
HLA-F-230ENST00000606273 BAIAP3O94812 1187 aa14.42□□□□□ -0.1
HLA-F-230ENST00000606273 PDE6AP16499 860 aa14.42□□□□□ -0.1
HLA-F-230ENST00000606273 TTF1Q15361 905 aaPredicted RBP14.42□□□□□ -0.1
HLA-F-230ENST00000606273 RETREG2Q8NC44 543 aa14.42□□□□□ -0.1
HLA-F-230ENST00000606273 CCDC136Q96JN2 1154 aa14.42□□□□□ -0.1
HLA-F-230ENST00000606273 CNTNAP3BQ96NU0 1288 aa14.42□□□□□ -0.1
HLA-F-230ENST00000606273 CNTNAP3Q9BZ76 1288 aa14.42□□□□□ -0.1
HLA-F-230ENST00000606273 PRKAG3Q9UGI9 489 aa14.42□□□□□ -0.1
HLA-F-230ENST00000606273 H3BQ06 376 aaPredicted RBP14.41□□□□□ -0.1
HLA-F-230ENST00000606273 SLC9C2Q5TAH2 1124 aa14.41□□□□□ -0.1
HLA-F-230ENST00000606273 FOXD4L5Q5VV16 416 aaPredicted RBP14.41□□□□□ -0.1
HLA-F-230ENST00000606273 TAPT1Q6NXT6 567 aa14.41□□□□□ -0.1
HLA-F-230ENST00000606273 CENPQQ7L2Z9 268 aaPredicted RBP14.41□□□□□ -0.1
HLA-F-230ENST00000606273 TGS1Q96RS0 853 aaKnown RBP14.41□□□□□ -0.1
HLA-F-230ENST00000606273 OSBPL3Q9H4L5 887 aa14.41□□□□□ -0.1
HLA-F-230ENST00000606273 SLC38A10Q9HBR0 1119 aa14.41□□□□□ -0.1
HLA-F-230ENST00000606273 ZNF532Q9HCE3 1301 aa14.41□□□□□ -0.1
HLA-F-230ENST00000606273 ASB14A6NK59 587 aa14.4□□□□□ -0.1
HLA-F-230ENST00000606273 F5H6K3 240 aa14.4□□□□□ -0.1
HLA-F-230ENST00000606273 IRS1P35568 1242 aa14.4□□□□□ -0.1
HLA-F-230ENST00000606273 ADD2P35612 726 aa14.4□□□□□ -0.1
HLA-F-230ENST00000606273 KCNJ6P48051 423 aa14.4□□□□□ -0.1
HLA-F-230ENST00000606273 WDR5P61964 334 aaKnown RBP14.4□□□□□ -0.1
HLA-F-230ENST00000606273 KLRC3Q07444 240 aa14.4□□□□□ -0.1
HLA-F-230ENST00000606273 C12orf60Q5U649 245 aa14.4□□□□□ -0.1
HLA-F-230ENST00000606273 LCORLQ8N3X6 602 aa14.4□□□□□ -0.1
HLA-F-230ENST00000606273 KBTBD3Q8NAB2 608 aa14.4□□□□□ -0.1
HLA-F-230ENST00000606273 RAD9AQ99638 391 aa14.4□□□□□ -0.1
HLA-F-230ENST00000606273 UPF3BQ9BZI7 483 aaKnown RBP14.4□□□□□ -0.1
HLA-F-230ENST00000606273 COL11A1P12107 1806 aaPredicted RBP14.39□□□□□ -0.11
HLA-F-230ENST00000606273 CYP2D7A0A087X1C5 515 aa14.39□□□□□ -0.11
HLA-F-230ENST00000606273 LINC01553A4QN01 128 aa14.39□□□□□ -0.11
HLA-F-230ENST00000606273 PRKAB2O43741 272 aa14.39□□□□□ -0.11
HLA-F-230ENST00000606273 OAZ1P54368 228 aa14.39□□□□□ -0.11
HLA-F-230ENST00000606273 PURAQ00577 322 aaKnown RBP14.39□□□□□ -0.11
HLA-F-230ENST00000606273 GPNMBQ14956 572 aa14.39□□□□□ -0.11
HLA-F-230ENST00000606273 C16orf86Q6ZW13 317 aa14.39□□□□□ -0.11
HLA-F-230ENST00000606273 BMP8AQ7Z5Y6 402 aa14.39□□□□□ -0.11
HLA-F-230ENST00000606273 ADHFE1Q8IWW8 467 aa14.39□□□□□ -0.11
HLA-F-230ENST00000606273 VWA5B2Q8N398 1253 aa14.39□□□□□ -0.11
HLA-F-230ENST00000606273 PPP4R2Q9NY27 417 aa14.39□□□□□ -0.11
HLA-F-230ENST00000606273 CTDP1Q9Y5B0 961 aaPredicted RBP14.39□□□□□ -0.11
HLA-F-230ENST00000606273 DDX49Q9Y6V7 483 aaKnown RBP14.39□□□□□ -0.11
HLA-F-230ENST00000606273 PARP14Q460N5 1801 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 USP17L12C9JPN9 530 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 USP17L21D6R901 530 aa14.38□□□□□ -0.11
HLA-F-230ENST00000606273 GJB5O95377 273 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms