RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 NFE2L2Q16236 605 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 KCNA10Q16322 511 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 MAP9Q49MG5 647 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 EMC10Q5UCC4 262 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 WDR93Q6P2C0 686 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 ATG14Q6ZNE5 492 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 LCNL1Q6ZST4 164 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 BRAPQ7Z569 592 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 THAP5Q7Z6K1 395 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 TAX1BP1Q86VP1 789 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 CCDC50Q8IVM0 306 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 DHX40Q8IX18 779 aaKnown RBP4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 CEP112Q8N8E3 955 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 XAGE3Q8WTP9 111 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 LEO1Q8WVC0 666 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 UBE2FQ969M7 185 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 FAXDC2Q96IV6 333 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 CARD6Q9BX69 1037 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 SLC12A5Q9H2X9 1139 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 VEZTQ9HBM0 779 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 TRMT1Q9NXH9 659 aaKnown RBP4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 TERF2IPQ9NYB0 399 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 ZSWIM5Q9P217 1185 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 MCM8Q9UJA3 840 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 CYP8B1Q9UNU6 501 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 SH3BP1Q9Y3L3 701 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 SNX14Q9Y5W7 946 aa4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 ZCCHC11Q5TAX3 1644 aaKnown RBP4.63□□□□□ -1.67
HMGB1P50-201ENST00000605814 KIF1BO60333 1816 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 TSPOAP1O95153 1857 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 MYH15Q9Y2K3 1946 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 VWDEQ8N2E2 1590 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 TET3O43151 1660 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 GOLGA6L4A6NEF3 574 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 BECN2A8MW95 431 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 PRR33A8MZF0 331 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 EBAG9O00559 213 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 PRRG2O14669 202 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 ARHGAP6O43182 974 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 DIAPH1O60610 1272 aaKnown RBP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 RAB11FIP3O75154 756 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 PAGE1O75459 146 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 URI1O94763 535 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 PRPF6O94906 941 aaKnown RBP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 SEC31AO94979 1220 aaKnown RBP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 CLSTN1O94985 981 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 SLITRK5O94991 958 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 IGHA2P01877 340 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 BMP6P22004 513 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 SFPQP23246 707 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 MCM3P25205 808 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 ELF1P32519 619 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 NTF4P34130 210 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 AMPHP49418 695 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 MNAT1P51948 309 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 HK2P52789 917 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 SLC8A3P57103 927 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 ATP8B2P98198 1209 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 ADCY2Q08462 1091 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 DRP2Q13474 957 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 PLCB4Q15147 1175 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 ENOX2Q16206 610 aaKnown RBP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 TWISTNBQ3B726 338 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 NBPF6Q5VWK0 638 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 PCNX4Q63HM2 1172 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 LARP1BQ659C4 914 aaKnown RBP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 SCARA3Q6AZY7 606 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 ARMCX5Q6P1M9 558 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 LETMD1Q6P1Q0 360 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 GBP6Q6ZN66 633 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 EP400NLQ6ZTU2 488 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 B4GALNT4Q76KP1 1039 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 SRGAP1Q7Z6B7 1085 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 TXNDC2Q86VQ3 553 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 NBPF5PQ86XG9 351 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 TEX11Q8IYF3 940 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 MAB21L3Q8N8X9 362 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 ENGASEQ8NFI3 743 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 OTUD7AQ8TE49 926 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 MYLIPQ8WY64 445 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 PGBD1Q96JS3 809 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 CABS1Q96KC9 395 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 COX4I2Q96KJ9 171 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 SPATA32Q96LK8 384 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 NBPF4Q96M43 638 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 LSG1Q9H089 658 aaKnown RBP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 C1orf115Q9H7X2 142 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 C14orf93Q9H972 538 aaKnown RBP4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 BATF3Q9NR55 127 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 SEMA3GQ9NS98 782 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 HOMER3Q9NSC5 361 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 PDRG1Q9NUG6 133 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 SPG7Q9UQ90 795 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 USP16Q9Y5T5 823 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 PLCH2O75038 1416 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 ABCC3O15438 1527 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 ARHGEF40Q8TER5 1519 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 SYCP2Q9BX26 1530 aa4.62□□□□□ -1.67
HMGB1P50-201ENST00000605814 DEPDC5O75140 1603 aa4.61□□□□□ -1.67
HMGB1P50-201ENST00000605814 H0YHG0 523 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms