RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 SMCO2A6NFE2 343 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 BHMG1C9JSJ3 638 aaPredicted RBP16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 CES2O00748 559 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 FAM228BP0C875 321 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 POLR2FP61218 127 aaKnown RBP16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 ZNF844Q08AG5 666 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 KIAA0753Q2KHM9 967 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 ZCWPW2Q504Y3 356 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 OR2W6PQ8NHA6 318 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 TBCKQ8TEA7 893 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 MTMR9Q96QG7 549 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 CPVLQ9H3G5 476 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 CENPHQ9H3R5 247 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 COL4A3BPQ9Y5P4 624 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 TRAPPC3O43617 180 aa16.77■□□□□ 0.27
LYSMD4-211ENST00000604213 CUL1Q13616 776 aa16.77■□□□□ 0.27
LYSMD4-211ENST00000604213 HLTFQ14527 1009 aaKnown RBP eCLIP16.77■□□□□ 0.27
LYSMD4-211ENST00000604213 PREPLQ4J6C6 727 aaPredicted RBP16.77■□□□□ 0.27
LYSMD4-211ENST00000604213 CCDC121Q6ZUS5 278 aa16.77■□□□□ 0.27
LYSMD4-211ENST00000604213 SCFD2Q8WU76 684 aa16.77■□□□□ 0.27
LYSMD4-211ENST00000604213 RAD54LQ92698 747 aa16.77■□□□□ 0.27
LYSMD4-211ENST00000604213 TMEM47Q9BQJ4 181 aa16.77■□□□□ 0.27
LYSMD4-211ENST00000604213 LZTS2Q9BRK4 669 aa16.77■□□□□ 0.27
LYSMD4-211ENST00000604213 ACTR5Q9H9F9 607 aaPredicted RBP16.77■□□□□ 0.27
LYSMD4-211ENST00000604213 C6orf50Q9HD87 102 aa16.77■□□□□ 0.27
LYSMD4-211ENST00000604213 KLRF2D3W0D1 207 aa16.76■□□□□ 0.27
LYSMD4-211ENST00000604213 PSMD2Q13200 908 aa16.76■□□□□ 0.27
LYSMD4-211ENST00000604213 TACO1Q9BSH4 297 aaKnown RBP16.76■□□□□ 0.27
LYSMD4-211ENST00000604213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.76■□□□□ 0.27
LYSMD4-211ENST00000604213 SPZ1Q9BXG8 430 aa16.76■□□□□ 0.27
LYSMD4-211ENST00000604213 HOXA7P31268 230 aaPredicted RBP16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 CRKLP46109 303 aaKnown RBP16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 NT5C2P49902 561 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 FXR2P51116 673 aaKnown RBP eCLIP16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 ORC2Q13416 577 aaPredicted RBP16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 BIRC3Q13489 604 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 RPS6KA1Q15418 735 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 QPCTQ16769 361 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 SPRED3Q2MJR0 410 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 TAF4BQ92750 862 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 DDX12PQ92771 950 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 LRRC45Q96CN5 670 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 OSBPL7Q9BZF2 842 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 MCM8Q9UJA3 840 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 KAT6BQ8WYB5 2073 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 BTNL10A8MVZ5 291 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 KCNK3O14649 394 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 GNA11P29992 359 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 RDXP35241 583 aaKnown RBP16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 MMP14P50281 582 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 FKBP3Q00688 224 aaKnown RBP16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 DDX42Q86XP3 938 aaKnown RBP eCLIP16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 MYOCDQ8IZQ8 938 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 CDK5RAP3Q96JB5 506 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 CCDC114Q96M63 670 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 NEUROG2Q9H2A3 272 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 MKNK2Q9HBH9 465 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 AIPL1Q9NZN9 384 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 ADAMTS1Q9UHI8 967 aa16.75■□□□□ 0.27
LYSMD4-211ENST00000604213 DNM1LO00429 736 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 TSPY3P0CV98 308 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 TSPY8P0CW00 308 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 TMOD1P28289 359 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 ARID5AQ03989 594 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 KLHL30Q0D2K2 578 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 RAPGEF1Q13905 1077 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 CALCRLQ16602 461 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 KCNK18Q7Z418 384 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 NUDT12Q9BQG2 462 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 ABCA3Q99758 1704 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 C5orf60A6NFR6 353 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 TRAF5O00463 557 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 C21orf2O43822 256 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 KIF4AO95239 1232 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 CTNNA1P35221 906 aaKnown RBP16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 USP11P51784 963 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 PPARDQ03181 441 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 BYSLQ13895 437 aaKnown RBP16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 SF3B3Q15393 1217 aaKnown RBP16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 WLSQ5T9L3 541 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 AGBL2Q5U5Z8 902 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 RUFY4Q6ZNE9 571 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 ACTRT1Q8TDG2 376 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 PBKQ96KB5 322 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 TMEM260Q9NX78 707 aa16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 BIN2Q9UBW5 565 aaPredicted RBP16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 CNOT8Q9UFF9 292 aaKnown RBP16.74■□□□□ 0.27
LYSMD4-211ENST00000604213 PAEPP09466 180 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 ZBTB48P10074 688 aaPredicted RBP16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 NEDD9Q14511 834 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 ASIC2Q16515 512 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 TMEM119Q4V9L6 283 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 ANKRD20A8PQ5CZ79 823 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 FAM133AQ8N9E0 248 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 SEC16BQ96JE7 1060 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 DONSONQ9NYP3 566 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 TFCP2L1Q9NZI6 479 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 STX8Q9UNK0 236 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 LEMD3Q9Y2U8 911 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 ROBO3Q96MS0 1386 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms