RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 ZEB2O60315 1214 aa17.67■□□□□ 0.42
CDCA3-211ENST00000603043 CYP3A7P24462 503 aa17.67■□□□□ 0.42
CDCA3-211ENST00000603043 BECN1Q14457 450 aa17.67■□□□□ 0.42
CDCA3-211ENST00000603043 UBE2Q1Q7Z7E8 422 aa17.67■□□□□ 0.42
CDCA3-211ENST00000603043 PPTC7Q8NI37 304 aa17.67■□□□□ 0.42
CDCA3-211ENST00000603043 AFG1LQ8WV93 481 aa17.67■□□□□ 0.42
CDCA3-211ENST00000603043 SPATA33Q96N06 139 aa17.67■□□□□ 0.42
CDCA3-211ENST00000603043 NAP1L4Q99733 375 aaKnown RBP17.67■□□□□ 0.42
CDCA3-211ENST00000603043 TSEN34Q9BSV6 310 aaKnown RBP17.67■□□□□ 0.42
CDCA3-211ENST00000603043 BCAS3Q9H6U6 928 aa17.67■□□□□ 0.42
CDCA3-211ENST00000603043 MOXD2PA6NHM9 499 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 CCNT1O60563 726 aaKnown RBP17.66■□□□□ 0.42
CDCA3-211ENST00000603043 ASGR1P07306 291 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 GCFC2P16383 781 aaKnown RBP17.66■□□□□ 0.42
CDCA3-211ENST00000603043 ACLYP53396 1101 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 Q4G0T1 1027 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 PPP4R3AQ6IN85 833 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 NECAB2Q7Z6G3 386 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 SPRYD3Q8NCJ5 442 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 ZNF577Q9BSK1 485 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 C11orf49Q9H6J7 331 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 DDX25Q9UHL0 483 aaKnown RBP17.66■□□□□ 0.42
CDCA3-211ENST00000603043 PHF24Q9UPV7 400 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 IPO5O00410 1097 aaKnown RBP17.66■□□□□ 0.42
CDCA3-211ENST00000603043 MMP3P08254 477 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 SYT1P21579 422 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 HSDL1Q3SXM5 330 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 MBOAT7Q96N66 472 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 SDF4Q9BRK5 362 aa17.66■□□□□ 0.42
CDCA3-211ENST00000603043 VPS37CA5D8V6 355 aaPredicted RBP17.65■□□□□ 0.42
CDCA3-211ENST00000603043 NOP56O00567 594 aaKnown RBP17.65■□□□□ 0.42
CDCA3-211ENST00000603043 COL6A1P12109 1028 aa17.65■□□□□ 0.42
CDCA3-211ENST00000603043 ITGB3BPQ13352 177 aaPredicted RBP17.65■□□□□ 0.42
CDCA3-211ENST00000603043 UIMC1Q96RL1 719 aa17.65■□□□□ 0.42
CDCA3-211ENST00000603043 JPH1Q9HDC5 661 aaPredicted RBP17.65■□□□□ 0.42
CDCA3-211ENST00000603043 NFASCO94856 1347 aa17.65■□□□□ 0.42
CDCA3-211ENST00000603043 SLC37A4O43826 429 aa17.64■□□□□ 0.41
CDCA3-211ENST00000603043 SP4Q02446 784 aa17.64■□□□□ 0.41
CDCA3-211ENST00000603043 FERMT2Q96AC1 680 aa17.64■□□□□ 0.41
CDCA3-211ENST00000603043 SENP6Q9GZR1 1112 aaPredicted RBP17.64■□□□□ 0.41
CDCA3-211ENST00000603043 A0A1W2PQ45 241 aaPredicted RBP17.64■□□□□ 0.41
CDCA3-211ENST00000603043 A0A1W2PQY0 241 aa17.64■□□□□ 0.41
CDCA3-211ENST00000603043 MSH4O15457 936 aa17.64■□□□□ 0.41
CDCA3-211ENST00000603043 ATP2B1P20020 1258 aa17.64■□□□□ 0.41
CDCA3-211ENST00000603043 DGKDQ16760 1214 aa17.64■□□□□ 0.41
CDCA3-211ENST00000603043 CXCL17Q6UXB2 119 aa17.64■□□□□ 0.41
CDCA3-211ENST00000603043 GLT1D1Q96MS3 346 aa17.64■□□□□ 0.41
CDCA3-211ENST00000603043 POLR3EQ9NVU0 708 aa17.64■□□□□ 0.41
CDCA3-211ENST00000603043 SLC9A2Q9UBY0 812 aa17.64■□□□□ 0.41
CDCA3-211ENST00000603043 NOL7Q9UMY1 257 aaKnown RBP17.64■□□□□ 0.41
CDCA3-211ENST00000603043 WNT7AO00755 349 aa17.63■□□□□ 0.41
CDCA3-211ENST00000603043 MYL3P08590 195 aa17.63■□□□□ 0.41
CDCA3-211ENST00000603043 PURAQ00577 322 aaKnown RBP17.63■□□□□ 0.41
CDCA3-211ENST00000603043 GPR20Q99678 358 aa17.63■□□□□ 0.41
CDCA3-211ENST00000603043 TBC1D22BQ9NU19 505 aa17.63■□□□□ 0.41
CDCA3-211ENST00000603043 SCN10AQ9Y5Y9 1956 aa17.63■□□□□ 0.41
CDCA3-211ENST00000603043 DDX39AO00148 427 aaKnown RBP17.62■□□□□ 0.41
CDCA3-211ENST00000603043 DHX15O43143 795 aaKnown RBP17.62■□□□□ 0.41
CDCA3-211ENST00000603043 KPNA6O60684 536 aa17.62■□□□□ 0.41
CDCA3-211ENST00000603043 TRAPPC10P48553 1259 aa17.62■□□□□ 0.41
CDCA3-211ENST00000603043 ETNPPLQ8TBG4 499 aa17.62■□□□□ 0.41
CDCA3-211ENST00000603043 STARD7Q9NQZ5 370 aa17.62■□□□□ 0.41
CDCA3-211ENST00000603043 TELO2Q9Y4R8 837 aa17.62■□□□□ 0.41
CDCA3-211ENST00000603043 STX6O43752 255 aa17.62■□□□□ 0.41
CDCA3-211ENST00000603043 PPFIA4O75335 1185 aa17.62■□□□□ 0.41
CDCA3-211ENST00000603043 CABYRO75952 493 aa17.62■□□□□ 0.41
CDCA3-211ENST00000603043 HOXD8P13378 290 aaPredicted RBP17.62■□□□□ 0.41
CDCA3-211ENST00000603043 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
CDCA3-211ENST00000603043 SLC5A5Q92911 643 aa17.62■□□□□ 0.41
CDCA3-211ENST00000603043 ALPK3Q96L96 1907 aa17.62■□□□□ 0.41
CDCA3-211ENST00000603043 NEMFO60524 1076 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 RGS19P49795 217 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 TTC38Q5R3I4 469 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 LRCH2Q5VUJ6 765 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 FERMT3Q86UX7 667 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 GJA10Q969M2 543 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 VTI1AQ96AJ9 217 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 RIT2Q99578 217 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 MTG1Q9BT17 334 aaPredicted RBP17.61■□□□□ 0.41
CDCA3-211ENST00000603043 KCNMB3Q9NPA1 279 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 TCEAL9Q9UHQ7 104 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 WDR81Q562E7 1941 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 ELP1O95163 1332 aa17.61■□□□□ 0.41
CDCA3-211ENST00000603043 GAS7O60861 476 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 ZNF286BP0CG31 522 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 MCM7P33993 719 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 SEPT1Q8WYJ6 367 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 MTMR6Q9Y217 621 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 TBX3O15119 743 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 CCNE2O96020 404 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 TCF7P36402 384 aaPredicted RBP17.6■□□□□ 0.41
CDCA3-211ENST00000603043 ATN1P54259 1190 aaPredicted RBP17.6■□□□□ 0.41
CDCA3-211ENST00000603043 ACTR2P61160 394 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 KRT76Q01546 638 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 RILPL1Q5EBL4 403 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 BRAPQ7Z569 592 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 FAM20AQ96MK3 541 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 TEKT3Q9BXF9 490 aa17.6■□□□□ 0.41
CDCA3-211ENST00000603043 MYH9P35579 1960 aaKnown RBP17.6■□□□□ 0.41
CDCA3-211ENST00000603043 GSTTP1A0A1W2PQM5 241 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms