RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 IL23AQ9NPF7 189 aa25.02■■□□□ 1.6
PPFIA3-208ENST00000602726 HDAC6Q9UBN7 1215 aa25.02■■□□□ 1.6
PPFIA3-208ENST00000602726 LAMA2P24043 3122 aaKnown RBP25.02■■□□□ 1.6
PPFIA3-208ENST00000602726 MAFGO15525 162 aa25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 ACRP10323 421 aa25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 GNA11P29992 359 aa25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 SP4Q02446 784 aa25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 SSRP1Q08945 709 aaKnown RBP25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 JAKMIP3Q5VZ66 844 aa25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 CPLX2Q6PUV4 134 aaKnown RBP25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 C16orf59Q7L2K0 433 aa25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 GPR20Q99678 358 aa25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 C16orf70Q9BSU1 422 aa25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 WNT8AQ9H1J5 351 aa25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 GTF2IRD1Q9UHL9 959 aa25.01■■□□□ 1.59
PPFIA3-208ENST00000602726 ATP9AO75110 1047 aa25■■□□□ 1.59
PPFIA3-208ENST00000602726 LGALS2P05162 132 aa25■■□□□ 1.59
PPFIA3-208ENST00000602726 KCNA2P16389 499 aa25■■□□□ 1.59
PPFIA3-208ENST00000602726 TMEM240Q5SV17 173 aa25■■□□□ 1.59
PPFIA3-208ENST00000602726 MCTP2Q6DN12 878 aa25■■□□□ 1.59
PPFIA3-208ENST00000602726 PSRC1Q6PGN9 363 aaPredicted RBP25■■□□□ 1.59
PPFIA3-208ENST00000602726 RETREG2Q8NC44 543 aa25■■□□□ 1.59
PPFIA3-208ENST00000602726 CCDC148Q8NFR7 591 aa25■■□□□ 1.59
PPFIA3-208ENST00000602726 MXRA8Q9BRK3 442 aa25■■□□□ 1.59
PPFIA3-208ENST00000602726 PKD2L1Q9P0L9 805 aa25■■□□□ 1.59
PPFIA3-208ENST00000602726 DOCK5Q9H7D0 1870 aa25■■□□□ 1.59
PPFIA3-208ENST00000602726 H3BRB1 525 aa24.99■■□□□ 1.59
PPFIA3-208ENST00000602726 SREBF1P36956 1147 aa24.99■■□□□ 1.59
PPFIA3-208ENST00000602726 BFSP2Q13515 415 aa24.99■■□□□ 1.59
PPFIA3-208ENST00000602726 ZNF365Q70YC5 407 aa24.99■■□□□ 1.59
PPFIA3-208ENST00000602726 RPUSD2Q8IZ73 545 aaKnown RBP24.99■■□□□ 1.59
PPFIA3-208ENST00000602726 REXO1Q8N1G1 1221 aaKnown RBP24.99■■□□□ 1.59
PPFIA3-208ENST00000602726 BICD2Q8TD16 824 aa24.99■■□□□ 1.59
PPFIA3-208ENST00000602726 SCLYQ96I15 445 aa24.99■■□□□ 1.59
PPFIA3-208ENST00000602726 TUT1Q9H6E5 874 aaKnown RBP24.99■■□□□ 1.59
PPFIA3-208ENST00000602726 PITPNM1O00562 1244 aa24.98■■□□□ 1.59
PPFIA3-208ENST00000602726 SEC24BO95487 1268 aa24.98■■□□□ 1.59
PPFIA3-208ENST00000602726 ZNF76P36508 570 aa24.98■■□□□ 1.59
PPFIA3-208ENST00000602726 ANKRD1Q15327 319 aa24.98■■□□□ 1.59
PPFIA3-208ENST00000602726 CEP55Q53EZ4 464 aa24.98■■□□□ 1.59
PPFIA3-208ENST00000602726 CCDC155Q8N6L0 562 aa24.98■■□□□ 1.59
PPFIA3-208ENST00000602726 VPS54Q9P1Q0 977 aa24.98■■□□□ 1.59
PPFIA3-208ENST00000602726 FGBP02675 491 aa24.97■■□□□ 1.59
PPFIA3-208ENST00000602726 ARHGAP4P98171 946 aa24.97■■□□□ 1.59
PPFIA3-208ENST00000602726 UTP14CQ5TAP6 766 aaKnown RBP24.97■■□□□ 1.59
PPFIA3-208ENST00000602726 CYP2W1Q8TAV3 490 aa24.97■■□□□ 1.59
PPFIA3-208ENST00000602726 SLKQ9H2G2 1235 aaPredicted RBP24.97■■□□□ 1.59
PPFIA3-208ENST00000602726 SH3GLB2Q9NR46 395 aa24.97■■□□□ 1.59
PPFIA3-208ENST00000602726 KCNH7Q9NS40 1196 aa24.97■■□□□ 1.59
PPFIA3-208ENST00000602726 ZNF215Q9UL58 517 aaPredicted RBP24.97■■□□□ 1.59
PPFIA3-208ENST00000602726 TELO2Q9Y4R8 837 aa24.97■■□□□ 1.59
PPFIA3-208ENST00000602726 SMAD3P84022 425 aaKnown RBP24.96■■□□□ 1.59
PPFIA3-208ENST00000602726 DEFB123Q8N688 67 aa24.96■■□□□ 1.59
PPFIA3-208ENST00000602726 CAGE1Q8TC20 777 aa24.96■■□□□ 1.59
PPFIA3-208ENST00000602726 IL17RAQ96F46 866 aa24.96■■□□□ 1.59
PPFIA3-208ENST00000602726 CTAGE1Q96RT6 745 aa24.96■■□□□ 1.59
PPFIA3-208ENST00000602726 TPCN1Q9ULQ1 816 aa24.96■■□□□ 1.59
PPFIA3-208ENST00000602726 MEIS1O00470 390 aa24.95■■□□□ 1.58
PPFIA3-208ENST00000602726 ADAMTS3O15072 1205 aa24.95■■□□□ 1.58
PPFIA3-208ENST00000602726 CDKL5O76039 1030 aa24.95■■□□□ 1.58
PPFIA3-208ENST00000602726 DEXIO95424 95 aa24.95■■□□□ 1.58
PPFIA3-208ENST00000602726 AK2P54819 239 aa24.95■■□□□ 1.58
PPFIA3-208ENST00000602726 NLRP5P59047 1200 aa24.95■■□□□ 1.58
PPFIA3-208ENST00000602726 TRIM50Q86XT4 487 aa24.95■■□□□ 1.58
PPFIA3-208ENST00000602726 SEPT1Q8WYJ6 367 aa24.95■■□□□ 1.58
PPFIA3-208ENST00000602726 SDF4Q9BRK5 362 aa24.95■■□□□ 1.58
PPFIA3-208ENST00000602726 MTIF3Q9H2K0 278 aaKnown RBP24.95■■□□□ 1.58
PPFIA3-208ENST00000602726 C17orf102A2RUQ5 167 aa24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 PFKMP08237 780 aa24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 IQCF3P0C7M6 154 aa24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 ARP10275 920 aa24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 RFC2P35250 354 aa24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 TCF7P36402 384 aaPredicted RBP24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 ZNF200P98182 395 aaPredicted RBP24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 SCRN1Q12765 414 aa24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 PTK7Q13308 1070 aa24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 Q7L0L9 218 aa24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 DEFB128Q7Z7B8 93 aa24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 HERVK_113Q902F9 699 aa24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 JPH1Q9HDC5 661 aaPredicted RBP24.94■■□□□ 1.58
PPFIA3-208ENST00000602726 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 PFKFB2O60825 505 aa24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 CYP3A4P08684 503 aa24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 SMIM10L2AP0DMW4 78 aa24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 SMIM10L2BP0DMW5 78 aa24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 NIPA1Q7RTP0 329 aa24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 OTOP2Q7RTS6 562 aa24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 RASGRP4Q8TDF6 673 aa24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 AFAP1L1Q8TED9 768 aa24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 DHX38Q92620 1227 aaKnown RBP24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 AGO4Q9HCK5 861 aaKnown RBP24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 TRIP12Q14669 1992 aaPredicted RBP24.93■■□□□ 1.58
PPFIA3-208ENST00000602726 GSTTP1A0A1W2PQM5 241 aa24.92■■□□□ 1.58
PPFIA3-208ENST00000602726 NEK4P51957 841 aa24.92■■□□□ 1.58
PPFIA3-208ENST00000602726 RASIP1Q5U651 963 aa24.92■■□□□ 1.58
PPFIA3-208ENST00000602726 FAM109BQ6ICB4 259 aaPredicted RBP24.92■■□□□ 1.58
PPFIA3-208ENST00000602726 PLA2G4DQ86XP0 818 aa24.92■■□□□ 1.58
PPFIA3-208ENST00000602726 SLC9A2Q9UBY0 812 aa24.92■■□□□ 1.58
PPFIA3-208ENST00000602726 NFASCO94856 1347 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms