RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 DTNBO60941 627 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 F2P00734 622 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 TIMP1P01033 207 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 CYP3A4P08684 503 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 FAM47CQ5HY64 1035 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 RASGRP4Q8TDF6 673 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 PPP1R13LQ8WUF5 828 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 GPR20Q99678 358 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 C16orf70Q9BSU1 422 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 KCNH7Q9NS40 1196 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 GTF3C3Q9Y5Q9 886 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 HAS3O00219 553 aa19.08■□□□□ 0.64
SSBP4-213ENST00000602088 NOP56O00567 594 aaKnown RBP19.08■□□□□ 0.64
SSBP4-213ENST00000602088 SUPT20HL2P0C7V6 817 aa19.08■□□□□ 0.64
SSBP4-213ENST00000602088 ZNF286BP0CG31 522 aa19.08■□□□□ 0.64
SSBP4-213ENST00000602088 PSEN2P49810 448 aa19.08■□□□□ 0.64
SSBP4-213ENST00000602088 CHMP4BP1P59074 171 aa19.08■□□□□ 0.64
SSBP4-213ENST00000602088 SESTD1Q86VW0 696 aa19.08■□□□□ 0.64
SSBP4-213ENST00000602088 KATNAL1Q9BW62 490 aa19.08■□□□□ 0.64
SSBP4-213ENST00000602088 TRMT13Q9NUP7 481 aaKnown RBP19.08■□□□□ 0.64
SSBP4-213ENST00000602088 PCDHA4Q9UN74 947 aa19.08■□□□□ 0.64
SSBP4-213ENST00000602088 LIMCH1Q9UPQ0 1083 aa19.08■□□□□ 0.64
SSBP4-213ENST00000602088 TELO2Q9Y4R8 837 aa19.08■□□□□ 0.64
SSBP4-213ENST00000602088 LAMA2P24043 3122 aaKnown RBP19.07■□□□□ 0.64
SSBP4-213ENST00000602088 FAM86B1E9PN63 330 aa19.07■□□□□ 0.64
SSBP4-213ENST00000602088 FAM86B2P0C5J1 330 aa19.07■□□□□ 0.64
SSBP4-213ENST00000602088 ARP10275 920 aa19.07■□□□□ 0.64
SSBP4-213ENST00000602088 FDPSP14324 419 aaKnown RBP19.07■□□□□ 0.64
SSBP4-213ENST00000602088 ZNF76P36508 570 aa19.07■□□□□ 0.64
SSBP4-213ENST00000602088 NPY5RQ15761 445 aa19.07■□□□□ 0.64
SSBP4-213ENST00000602088 GALNT17Q6IS24 598 aa19.07■□□□□ 0.64
SSBP4-213ENST00000602088 MFSD5Q6N075 450 aa19.07■□□□□ 0.64
SSBP4-213ENST00000602088 NIPA1Q7RTP0 329 aa19.07■□□□□ 0.64
SSBP4-213ENST00000602088 DAGLBQ8NCG7 672 aa19.07■□□□□ 0.64
SSBP4-213ENST00000602088 UPF2Q9HAU5 1272 aaKnown RBP19.07■□□□□ 0.64
SSBP4-213ENST00000602088 ORC3Q9UBD5 711 aaPredicted RBP19.07■□□□□ 0.64
SSBP4-213ENST00000602088 M0R2N6 131 aa19.06■□□□□ 0.64
SSBP4-213ENST00000602088 LGALS2P05162 132 aa19.06■□□□□ 0.64
SSBP4-213ENST00000602088 SP4Q02446 784 aa19.06■□□□□ 0.64
SSBP4-213ENST00000602088 MFSD10Q14728 455 aa19.06■□□□□ 0.64
SSBP4-213ENST00000602088 KIAA0753Q2KHM9 967 aa19.06■□□□□ 0.64
SSBP4-213ENST00000602088 TDHQ8IZJ6 230 aa19.06■□□□□ 0.64
SSBP4-213ENST00000602088 BLIDQ8IZY5 108 aa19.06■□□□□ 0.64
SSBP4-213ENST00000602088 NSUN7Q8NE18 718 aaKnown RBP19.06■□□□□ 0.64
SSBP4-213ENST00000602088 ALG1Q9BT22 464 aa19.06■□□□□ 0.64
SSBP4-213ENST00000602088 NOC4LQ9BVI4 516 aaKnown RBP19.06■□□□□ 0.64
SSBP4-213ENST00000602088 PPP1R12CQ9BZL4 782 aa19.06■□□□□ 0.64
SSBP4-213ENST00000602088 PKD2L1Q9P0L9 805 aa19.06■□□□□ 0.64
SSBP4-213ENST00000602088 LAMA3Q16787 3333 aa19.05■□□□□ 0.64
SSBP4-213ENST00000602088 IGLV3-22A0A075B6J6 115 aa19.05■□□□□ 0.64
SSBP4-213ENST00000602088 H3BRB1 525 aa19.05■□□□□ 0.64
SSBP4-213ENST00000602088 CYP2C9P11712 490 aa19.05■□□□□ 0.64
SSBP4-213ENST00000602088 ST3GAL1Q11201 340 aa19.05■□□□□ 0.64
SSBP4-213ENST00000602088 C7orf31Q8N865 590 aa19.05■□□□□ 0.64
SSBP4-213ENST00000602088 WASF1Q92558 559 aa19.05■□□□□ 0.64
SSBP4-213ENST00000602088 PHF20Q9BVI0 1012 aa19.05■□□□□ 0.64
SSBP4-213ENST00000602088 HIPK3Q9H422 1215 aa19.05■□□□□ 0.64
SSBP4-213ENST00000602088 TUT1Q9H6E5 874 aaKnown RBP19.05■□□□□ 0.64
SSBP4-213ENST00000602088 AGO4Q9HCK5 861 aaKnown RBP19.05■□□□□ 0.64
SSBP4-213ENST00000602088 GJB4Q9NTQ9 266 aa19.05■□□□□ 0.64
SSBP4-213ENST00000602088 KCNJ14Q9UNX9 436 aa19.05■□□□□ 0.64
SSBP4-213ENST00000602088 NFASCO94856 1347 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 UMODL1Q5DID0 1318 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 GSTTP1A0A1W2PQM5 241 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 EDIL3O43854 480 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 XBP1P17861 261 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 CIITAP33076 1130 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 CYP2C18P33260 490 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 FPGSQ05932 587 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 ITGB3BPQ13352 177 aaPredicted RBP19.04■□□□□ 0.64
SSBP4-213ENST00000602088 RABEP1Q15276 862 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 PTGISQ16647 500 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 GDF6Q6KF10 455 aaPredicted RBP19.04■□□□□ 0.64
SSBP4-213ENST00000602088 PLA2G4DQ86XP0 818 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 SEPT1Q8WYJ6 367 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 ZSCAN31Q96LW9 406 aaPredicted RBP19.04■□□□□ 0.64
SSBP4-213ENST00000602088 HDAC6Q9UBN7 1215 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 SLC9A2Q9UBY0 812 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 GTF2IRD1Q9UHL9 959 aa19.04■□□□□ 0.64
SSBP4-213ENST00000602088 JAK2O60674 1132 aa19.03■□□□□ 0.64
SSBP4-213ENST00000602088 TCF7P36402 384 aaPredicted RBP19.03■□□□□ 0.64
SSBP4-213ENST00000602088 USP11P51784 963 aa19.03■□□□□ 0.64
SSBP4-213ENST00000602088 EPHB4P54760 987 aa19.03■□□□□ 0.64
SSBP4-213ENST00000602088 TMEM199Q8N511 208 aa19.03■□□□□ 0.64
SSBP4-213ENST00000602088 TBCKQ8TEA7 893 aa19.03■□□□□ 0.64
SSBP4-213ENST00000602088 TBC1D32Q96NH3 1257 aa19.03■□□□□ 0.64
SSBP4-213ENST00000602088 CTAGE1Q96RT6 745 aa19.03■□□□□ 0.64
SSBP4-213ENST00000602088 SDF4Q9BRK5 362 aa19.03■□□□□ 0.64
SSBP4-213ENST00000602088 JPH1Q9HDC5 661 aaPredicted RBP19.03■□□□□ 0.64
SSBP4-213ENST00000602088 FXR1P51114 621 aaKnown RBP eCLIP19.02■□□□□ 0.64
SSBP4-213ENST00000602088 UTP14CQ5TAP6 766 aaKnown RBP19.02■□□□□ 0.64
SSBP4-213ENST00000602088 TRIM50Q86XT4 487 aa19.02■□□□□ 0.64
SSBP4-213ENST00000602088 IL27Q8NEV9 243 aa19.02■□□□□ 0.64
SSBP4-213ENST00000602088 NOD1Q9Y239 953 aa19.02■□□□□ 0.64
SSBP4-213ENST00000602088 IPO5O00410 1097 aaKnown RBP19.01■□□□□ 0.63
SSBP4-213ENST00000602088 DHX15O43143 795 aaKnown RBP19.01■□□□□ 0.63
SSBP4-213ENST00000602088 CSF2RAP15509 400 aa19.01■□□□□ 0.63
SSBP4-213ENST00000602088 CCL23P55773 120 aa19.01■□□□□ 0.63
SSBP4-213ENST00000602088 SETQ01105 290 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-213ENST00000602088 PPIGQ13427 754 aaKnown RBP eCLIP19.01■□□□□ 0.632e-8■■■■□ 22.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms