RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PLCG1P19174 1290 aa25.36■■□□□ 1.65
IRF3-228ENST00000601291 ZNF792Q3KQV3 632 aa25.36■■□□□ 1.65
IRF3-228ENST00000601291 MAGEF1Q9HAY2 307 aa25.36■■□□□ 1.65
IRF3-228ENST00000601291 SLC5A4Q9NY91 659 aa25.36■■□□□ 1.65
IRF3-228ENST00000601291 CHMP2AO43633 222 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 RGS20O76081 388 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 ITGB3BPQ13352 177 aaPredicted RBP25.35■■□□□ 1.65
IRF3-228ENST00000601291 LRSAM1Q6UWE0 723 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 DPP9Q86TI2 863 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 ZNF236Q9UL36 1845 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 SPATA31C2B4DYI2 1134 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 ICAM3P32942 547 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 GRB10Q13322 594 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 POSTNQ15063 836 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 PDXDC2PQ6P474 469 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 ZNF467Q7Z7K2 595 aaPredicted RBP25.35■■□□□ 1.65
IRF3-228ENST00000601291 MORC4Q8TE76 937 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 PLIN2Q99541 437 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 UNC45AQ9H3U1 944 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 STK17AQ9UEE5 414 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 DIS3Q9Y2L1 958 aaKnown RBP25.35■■□□□ 1.65
IRF3-228ENST00000601291 LRRC37A2A6NM11 1700 aa25.35■■□□□ 1.65
IRF3-228ENST00000601291 DDX39AO00148 427 aaKnown RBP25.34■■□□□ 1.65
IRF3-228ENST00000601291 DHX15O43143 795 aaKnown RBP25.34■■□□□ 1.65
IRF3-228ENST00000601291 COBLO75128 1261 aa25.34■■□□□ 1.65
IRF3-228ENST00000601291 HYIQ5T013 277 aa25.34■■□□□ 1.65
IRF3-228ENST00000601291 SASS6Q6UVJ0 657 aa25.34■■□□□ 1.65
IRF3-228ENST00000601291 MAP2K2P36507 400 aa25.33■■□□□ 1.65
IRF3-228ENST00000601291 KRT76Q01546 638 aa25.33■■□□□ 1.65
IRF3-228ENST00000601291 SEMA3FQ13275 785 aa25.33■■□□□ 1.65
IRF3-228ENST00000601291 TMEM119Q4V9L6 283 aa25.33■■□□□ 1.65
IRF3-228ENST00000601291 B3GNT9Q6UX72 402 aa25.33■■□□□ 1.65
IRF3-228ENST00000601291 SEPT14Q6ZU15 432 aa25.33■■□□□ 1.65
IRF3-228ENST00000601291 PAGE5Q96GU1 130 aa25.33■■□□□ 1.65
IRF3-228ENST00000601291 PNMA5Q96PV4 448 aa25.33■■□□□ 1.65
IRF3-228ENST00000601291 NUDT12Q9BQG2 462 aa25.33■■□□□ 1.65
IRF3-228ENST00000601291 KIAA1468Q9P260 1216 aa25.33■■□□□ 1.65
IRF3-228ENST00000601291 NFASCO94856 1347 aa25.32■■□□□ 1.64
IRF3-228ENST00000601291 EML1O00423 815 aa25.32■■□□□ 1.64
IRF3-228ENST00000601291 ATP9AO75110 1047 aa25.32■■□□□ 1.64
IRF3-228ENST00000601291 CCDC192P0DO97 292 aa25.32■■□□□ 1.64
IRF3-228ENST00000601291 RPA1P27694 616 aa25.32■■□□□ 1.64
IRF3-228ENST00000601291 PNOCQ13519 176 aa25.32■■□□□ 1.64
IRF3-228ENST00000601291 EPHA7Q15375 998 aa25.32■■□□□ 1.64
IRF3-228ENST00000601291 NAALADL2Q58DX5 795 aa25.32■■□□□ 1.64
IRF3-228ENST00000601291 MIER3Q7Z3K6 550 aa25.32■■□□□ 1.64
IRF3-228ENST00000601291 EIF2AK1Q9BQI3 630 aaKnown RBP25.32■■□□□ 1.64
IRF3-228ENST00000601291 POLR3CQ9BUI4 534 aaPredicted RBP25.32■■□□□ 1.64
IRF3-228ENST00000601291 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.31■■□□□ 1.64
IRF3-228ENST00000601291 KCNA2P16389 499 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 AFMP43652 599 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 MDM2Q00987 491 aaPredicted RBP25.31■■□□□ 1.64
IRF3-228ENST00000601291 GSE1Q14687 1217 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 KCNV1Q6PIU1 500 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 ARMCX2Q7L311 632 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 SH3RF1Q7Z6J0 888 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 NEK9Q8TD19 979 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 ZNFX1Q9P2E3 1918 aaKnown RBP25.31■■□□□ 1.64
IRF3-228ENST00000601291 MED24O75448 989 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 SFNP31947 248 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 JAK3P52333 1124 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 MORN1Q5T089 497 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 CATSPER3Q86XQ3 398 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 KCTD17Q8N5Z5 321 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 GIMAP8Q8ND71 665 aaPredicted RBP25.31■■□□□ 1.64
IRF3-228ENST00000601291 TUFT1Q9NNX1 390 aa25.31■■□□□ 1.64
IRF3-228ENST00000601291 POTEB3A0JP26 581 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 TNPO2O14787 897 aaKnown RBP25.3■■□□□ 1.64
IRF3-228ENST00000601291 FOXN1O15353 648 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 TGFB3P10600 412 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 VEGFBP49765 207 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 MAP2K5Q13163 448 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 ZNF746Q6NUN9 644 aaPredicted RBP25.3■■□□□ 1.64
IRF3-228ENST00000601291 POTEBQ6S5H4 581 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 EEPD1Q7L9B9 569 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 GRAMD1CQ8IYS0 662 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 SOCS4Q8WXH5 440 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 LARP4BQ92615 738 aaKnown RBP25.3■■□□□ 1.64
IRF3-228ENST00000601291 ERCC4Q92889 916 aaPredicted RBP25.3■■□□□ 1.64
IRF3-228ENST00000601291 SENP7Q9BQF6 1050 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 TSPY26PQ9H489 355 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 JPH1Q9HDC5 661 aaPredicted RBP25.3■■□□□ 1.64
IRF3-228ENST00000601291 KIAA1024Q9UPX6 916 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 SAMM50Q9Y512 469 aa25.3■■□□□ 1.64
IRF3-228ENST00000601291 PLXNA1Q9UIW2 1896 aa25.29■■□□□ 1.64
IRF3-228ENST00000601291 WDR64B1ANS9 1081 aa25.29■■□□□ 1.64
IRF3-228ENST00000601291 SMC2O95347 1197 aa25.29■■□□□ 1.64
IRF3-228ENST00000601291 MYL1P05976 194 aa25.29■■□□□ 1.64
IRF3-228ENST00000601291 MUTP22033 750 aa25.29■■□□□ 1.64
IRF3-228ENST00000601291 AMPD3Q01432 767 aa25.29■■□□□ 1.64
IRF3-228ENST00000601291 MAMDC4Q6UXC1 1216 aa25.29■■□□□ 1.64
IRF3-228ENST00000601291 RDM1Q8NG50 284 aa25.29■■□□□ 1.64
IRF3-228ENST00000601291 RAD54LQ92698 747 aa25.29■■□□□ 1.64
IRF3-228ENST00000601291 MAML3Q96JK9 1138 aa25.29■■□□□ 1.64
IRF3-228ENST00000601291 GTPBP6O43824 516 aaPredicted RBP25.28■■□□□ 1.64
IRF3-228ENST00000601291 ECM2O94769 699 aaPredicted RBP25.28■■□□□ 1.64
IRF3-228ENST00000601291 PRR29P0C7W0 189 aa25.28■■□□□ 1.64
IRF3-228ENST00000601291 SPATA31C1P0DKV0 1188 aa25.28■■□□□ 1.64
IRF3-228ENST00000601291 CYP4A11Q02928 519 aa25.28■■□□□ 1.64
IRF3-228ENST00000601291 TYRO3Q06418 890 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms