RNA–Protein interactions for RNA: ENST00000600962.5

SOX2-OT-235, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 472 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-235ENST00000600962 SP4Q02446 784 aa15.46■□□□□ 0.07
SOX2-OT-235ENST00000600962 ITGB3BPQ13352 177 aaPredicted RBP15.46■□□□□ 0.07
SOX2-OT-235ENST00000600962 NIPA1Q7RTP0 329 aa15.46■□□□□ 0.07
SOX2-OT-235ENST00000600962 PLA2G4DQ86XP0 818 aa15.46■□□□□ 0.07
SOX2-OT-235ENST00000600962 PPP1R13LQ8WUF5 828 aa15.46■□□□□ 0.07
SOX2-OT-235ENST00000600962 LENG9Q96B70 501 aa15.46■□□□□ 0.07
SOX2-OT-235ENST00000600962 TOX2Q96NM4 488 aa15.46■□□□□ 0.07
SOX2-OT-235ENST00000600962 GPR20Q99678 358 aa15.46■□□□□ 0.07
SOX2-OT-235ENST00000600962 AGO4Q9HCK5 861 aaKnown RBP15.46■□□□□ 0.07
SOX2-OT-235ENST00000600962 PDLIM7Q9NR12 457 aa15.46■□□□□ 0.07
SOX2-OT-235ENST00000600962 F2P00734 622 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 MMP1P03956 469 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 MCM2P49736 904 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 HMGN5P82970 282 aaKnown RBP15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 FAAP100Q0VG06 881 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 NR5A1Q13285 461 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 NONOQ15233 471 aaKnown RBP eCLIP15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 NBPF20Q3BBV1 942 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 EARS2Q5JPH6 523 aaKnown RBP15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 KRT40Q6A162 431 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 KRT25Q7Z3Z0 450 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 SH3RF1Q7Z6J0 888 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 FAM126BQ8IXS8 530 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 GIMAP8Q8ND71 665 aaPredicted RBP15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 TNFRSF25Q93038 417 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 C16orf70Q9BSU1 422 aa15.45■□□□□ 0.06
SOX2-OT-235ENST00000600962 MROH7Q68CQ1 1323 aa15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 TRIM43BA6NCK2 446 aa15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 DCDC2CA8MYV0 355 aa15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 NOP56O00567 594 aaKnown RBP15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 PPFIA4O75335 1185 aa15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 CD4P01730 458 aa15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 CLTBP09497 229 aa15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 KRT2P35908 639 aa15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 USP11P51784 963 aa15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 INF2Q27J81 1249 aa15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 PRR16Q569H4 304 aa15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 TRIM43Q96BQ3 446 aaPredicted RBP15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 UIMC1Q96RL1 719 aa15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 PRDM5Q9NQX1 630 aaPredicted RBP15.44■□□□□ 0.06
SOX2-OT-235ENST00000600962 NFASCO94856 1347 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 DNAH12Q6ZR08 3092 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 CCDC194A0A1B0GVG4 234 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 FAM205CA6NFA0 338 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 HAS3O00219 553 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 B4GALT4O60513 344 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 TDP2O95551 362 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 LGALS2P05162 132 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 PSEN2P49810 448 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 CHMP4BP1P59074 171 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 SETQ01105 290 aaPredicted RBP15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 GUCY1B3Q02153 619 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 TRIM29Q14134 588 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 PIK3AP1Q6ZUJ8 805 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 TRIM50Q86XT4 487 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 DIS3L2Q8IYB7 885 aaKnown RBP15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 C8orf76Q96K31 380 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 SEZ6LQ9BYH1 1024 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 TRPV6Q9H1D0 765 aa15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 JPH1Q9HDC5 661 aaPredicted RBP15.43■□□□□ 0.06
SOX2-OT-235ENST00000600962 CYP3A7-CYP3A51PA0A087WV96 503 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 GSTTP1A0A1W2PQM5 241 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 BTBD18B2RXH4 712 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 IPO5O00410 1097 aaKnown RBP15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 DHX15O43143 795 aaKnown RBP15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 CYP3A7P24462 503 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 ITGB8P26012 769 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 MFSD10Q14728 455 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 NFRKBQ6P4R8 1299 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 MBOAT7Q96N66 472 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 SDF4Q9BRK5 362 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 ZNF577Q9BSK1 485 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 KATNAL1Q9BW62 490 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 BRMS1Q9HCU9 246 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 TRMT13Q9NUP7 481 aaKnown RBP15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 SLC9A2Q9UBY0 812 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 TBX21Q9UL17 535 aa15.42■□□□□ 0.06
SOX2-OT-235ENST00000600962 DDX39AO00148 427 aaKnown RBP15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 KIAA0355O15063 1070 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 TLR3O15455 904 aaKnown RBP15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 MSH4O15457 936 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 CCNE2O96020 404 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 TCF7P36402 384 aaPredicted RBP15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 MAGEA10P43363 369 aaPredicted RBP15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 KIAA0753Q2KHM9 967 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 LETM2Q2VYF4 491 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 Q4G0T1 1027 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 FAM47CQ5HY64 1035 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 UTP14CQ5TAP6 766 aaKnown RBP15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 FAM184AQ8NB25 1140 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 FBXO18Q8NFZ0 1043 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 SEPT1Q8WYJ6 367 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 TMEM39AQ9NV64 488 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 PRKAG2Q9UGJ0 569 aa15.41■□□□□ 0.06
SOX2-OT-235ENST00000600962 H3BRB1 525 aa15.4■□□□□ 0.06
SOX2-OT-235ENST00000600962 SLC37A4O43826 429 aa15.4■□□□□ 0.06
SOX2-OT-235ENST00000600962 ACTR2P61160 394 aa15.4■□□□□ 0.06
SOX2-OT-235ENST00000600962 PTPN11Q06124 597 aaPredicted RBP15.4■□□□□ 0.06
SOX2-OT-235ENST00000600962 MOXD1Q6UVY6 613 aa15.4■□□□□ 0.06
SOX2-OT-235ENST00000600962 NEK8Q86SG6 692 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms