RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 UBA1P22314 1058 aaKnown RBP16.2■□□□□ 0.18
UPF1-211ENST00000600868 ADCYAP1R1P41586 468 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 FXR2P51116 673 aaKnown RBP eCLIP16.2■□□□□ 0.183e-8■■■■□ 23.4
UPF1-211ENST00000600868 TRIM32Q13049 653 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 PKN2Q16513 984 aaKnown RBP16.2■□□□□ 0.18
UPF1-211ENST00000600868 IL17AQ16552 155 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 LY6KQ17RY6 165 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 DUSP28Q4G0W2 176 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 KRI1Q8N9T8 703 aaKnown RBP16.2■□□□□ 0.18
UPF1-211ENST00000600868 TMEM87AQ8NBN3 555 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 TRPV1Q8NER1 839 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 GJA10Q969M2 543 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 SDF4Q9BRK5 362 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 TEKT3Q9BXF9 490 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 GDPD2Q9HCC8 539 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 PRDM10Q9NQV6 1147 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 PKD2L1Q9P0L9 805 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 VAV3Q9UKW4 847 aa16.2■□□□□ 0.18
UPF1-211ENST00000600868 CUTAO60888 179 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 INHAP05111 366 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 PRKAR2AP13861 404 aaKnown RBP16.19■□□□□ 0.18
UPF1-211ENST00000600868 SMPD1P17405 629 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 TECP42680 631 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 ME1P48163 572 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 PPP2R5CQ13362 524 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 PDIA5Q14554 519 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 TMEM266Q2M3C6 531 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 CELF3Q5SZQ8 465 aaKnown RBP16.19■□□□□ 0.18
UPF1-211ENST00000600868 B3GNT9Q6UX72 402 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 IGSF22Q8N9C0 903 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 UIMC1Q96RL1 719 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 FAM184BQ9ULE4 1060 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 PCDHA7Q9UN72 937 aa16.19■□□□□ 0.18
UPF1-211ENST00000600868 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.18■□□□□ 0.18
UPF1-211ENST00000600868 VWA3AA6NCI4 1184 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 SEPT4O43236 478 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 GGPS1O95749 300 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 AKR1A1P14550 325 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 LONP1P36776 959 aaKnown RBP16.18■□□□□ 0.18
UPF1-211ENST00000600868 KRT76Q01546 638 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 TNFAIP2Q03169 654 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 SPIRE1Q08AE8 756 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 AXDND1Q5T1B0 1012 aaPredicted RBP16.18■□□□□ 0.18
UPF1-211ENST00000600868 ZNF746Q6NUN9 644 aaPredicted RBP16.18■□□□□ 0.18
UPF1-211ENST00000600868 FBXO46Q6PJ61 603 aaPredicted RBP16.18■□□□□ 0.18
UPF1-211ENST00000600868 METTL7BQ6UX53 244 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 CYFIP1Q7L576 1253 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 ZNF579Q8NAF0 562 aaKnown RBP16.18■□□□□ 0.18
UPF1-211ENST00000600868 EMID1Q96A84 441 aaPredicted RBP16.18■□□□□ 0.18
UPF1-211ENST00000600868 RAB34Q9BZG1 259 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 JPH1Q9HDC5 661 aaPredicted RBP16.18■□□□□ 0.18
UPF1-211ENST00000600868 SLC9A2Q9UBY0 812 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 GNEQ9Y223 722 aaKnown RBP16.18■□□□□ 0.18
UPF1-211ENST00000600868 Q9Y3F1 56 aa16.18■□□□□ 0.18
UPF1-211ENST00000600868 FARP2O94887 1054 aaPredicted RBP16.17■□□□□ 0.18
UPF1-211ENST00000600868 GH1P01241 217 aa16.17■□□□□ 0.18
UPF1-211ENST00000600868 GRIN1Q05586 938 aa16.17■□□□□ 0.18
UPF1-211ENST00000600868 LAMC2Q13753 1193 aa16.17■□□□□ 0.18
UPF1-211ENST00000600868 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
UPF1-211ENST00000600868 ADALQ6DHV7 355 aa16.17■□□□□ 0.18
UPF1-211ENST00000600868 AK8Q96MA6 479 aa16.17■□□□□ 0.18
UPF1-211ENST00000600868 CLIC6Q96NY7 704 aa16.17■□□□□ 0.18
UPF1-211ENST00000600868 BCAS3Q9H6U6 928 aa16.17■□□□□ 0.18
UPF1-211ENST00000600868 MLXIPQ9HAP2 919 aa16.17■□□□□ 0.18
UPF1-211ENST00000600868 TCEAL9Q9UHQ7 104 aa16.17■□□□□ 0.18
UPF1-211ENST00000600868 GOLGA6L22H0YM25 854 aa16.16■□□□□ 0.18
UPF1-211ENST00000600868 DDX39AO00148 427 aaKnown RBP16.16■□□□□ 0.18
UPF1-211ENST00000600868 ADCY6O43306 1168 aa16.16■□□□□ 0.18
UPF1-211ENST00000600868 DUSP11O75319 330 aaKnown RBP16.16■□□□□ 0.18
UPF1-211ENST00000600868 CCNE2O96020 404 aa16.16■□□□□ 0.18
UPF1-211ENST00000600868 SFNP31947 248 aa16.16■□□□□ 0.18
UPF1-211ENST00000600868 ARHGAP1Q07960 439 aa16.16■□□□□ 0.18
UPF1-211ENST00000600868 SLC9C1Q4G0N8 1177 aa16.16■□□□□ 0.18
UPF1-211ENST00000600868 DHX37Q8IY37 1157 aaKnown RBP16.16■□□□□ 0.18
UPF1-211ENST00000600868 SMAP1Q8IYB5 467 aaPredicted RBP16.16■□□□□ 0.18
UPF1-211ENST00000600868 RDM1Q8NG50 284 aa16.16■□□□□ 0.18
UPF1-211ENST00000600868 COPS5Q92905 334 aa16.16■□□□□ 0.18
UPF1-211ENST00000600868 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
UPF1-211ENST00000600868 UNC45AQ9H3U1 944 aa16.16■□□□□ 0.18
UPF1-211ENST00000600868 HMX1Q9NP08 348 aaPredicted RBP16.16■□□□□ 0.18
UPF1-211ENST00000600868 STK24Q9Y6E0 443 aa16.16■□□□□ 0.18
UPF1-211ENST00000600868 A0A1W2PQ27 194 aa16.15■□□□□ 0.18
UPF1-211ENST00000600868 A0A1W2PQ64 194 aa16.15■□□□□ 0.18
UPF1-211ENST00000600868 A0A1W2PQD8 194 aa16.15■□□□□ 0.18
UPF1-211ENST00000600868 POTEMA6NI47 508 aa16.15■□□□□ 0.18
UPF1-211ENST00000600868 ATG7O95352 703 aa16.15■□□□□ 0.18
UPF1-211ENST00000600868 CNGA1P29973 690 aa16.15■□□□□ 0.18
UPF1-211ENST00000600868 CCND3P30281 292 aaPredicted RBP16.15■□□□□ 0.18
UPF1-211ENST00000600868 JAK3P52333 1124 aa16.15■□□□□ 0.18
UPF1-211ENST00000600868 GJC2Q5T442 439 aaPredicted RBP16.15■□□□□ 0.18
UPF1-211ENST00000600868 SH3TC2Q8TF17 1288 aa16.15■□□□□ 0.18
UPF1-211ENST00000600868 DOCK5Q9H7D0 1870 aa16.15■□□□□ 0.18
UPF1-211ENST00000600868 LRWD1Q9UFC0 647 aa16.15■□□□□ 0.18
UPF1-211ENST00000600868 WDR64B1ANS9 1081 aa16.14■□□□□ 0.17
UPF1-211ENST00000600868 EML1O00423 815 aa16.14■□□□□ 0.17
UPF1-211ENST00000600868 SLC26A4O43511 780 aa16.14■□□□□ 0.17
UPF1-211ENST00000600868 CHMP2AO43633 222 aa16.14■□□□□ 0.17
UPF1-211ENST00000600868 SORBS3O60504 671 aa16.14■□□□□ 0.17
UPF1-211ENST00000600868 MSCO60682 206 aa16.14■□□□□ 0.17
UPF1-211ENST00000600868 CMA1P23946 247 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms