RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CSPG5O95196 566 aa20.74■□□□□ 0.91
SSBP4-207ENST00000600244 HOXC8P31273 242 aa20.74■□□□□ 0.91
SSBP4-207ENST00000600244 APBB2Q92870 758 aa20.74■□□□□ 0.91
SSBP4-207ENST00000600244 P2RX5Q93086 422 aa20.74■□□□□ 0.91
SSBP4-207ENST00000600244 BARX2Q9UMQ3 279 aaPredicted RBP20.74■□□□□ 0.91
SSBP4-207ENST00000600244 WDR19Q8NEZ3 1342 aa20.74■□□□□ 0.91
SSBP4-207ENST00000600244 CAND2O75155 1236 aa20.73■□□□□ 0.91
SSBP4-207ENST00000600244 PPFIA4O75335 1185 aa20.73■□□□□ 0.91
SSBP4-207ENST00000600244 APPP05067 770 aa20.73■□□□□ 0.91
SSBP4-207ENST00000600244 SPPL3Q8TCT6 385 aa20.73■□□□□ 0.91
SSBP4-207ENST00000600244 ZNF689Q96CS4 500 aaPredicted RBP20.73■□□□□ 0.91
SSBP4-207ENST00000600244 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.73■□□□□ 0.91
SSBP4-207ENST00000600244 TPRP12270 2363 aaKnown RBP20.73■□□□□ 0.91
SSBP4-207ENST00000600244 EP300Q09472 2414 aaPredicted RBP20.73■□□□□ 0.91
SSBP4-207ENST00000600244 RAB11FIP3O75154 756 aa20.72■□□□□ 0.91
SSBP4-207ENST00000600244 NRIP1P48552 1158 aa20.72■□□□□ 0.91
SSBP4-207ENST00000600244 PPARAQ07869 468 aa20.72■□□□□ 0.91
SSBP4-207ENST00000600244 MCTP2Q6DN12 878 aa20.72■□□□□ 0.91
SSBP4-207ENST00000600244 FTSJ3Q8IY81 847 aaKnown RBP20.72■□□□□ 0.91
SSBP4-207ENST00000600244 ATP6V0A1Q93050 837 aa20.72■□□□□ 0.91
SSBP4-207ENST00000600244 RMDN1Q96DB5 314 aa20.72■□□□□ 0.91
SSBP4-207ENST00000600244 TAAR1Q96RJ0 339 aa20.72■□□□□ 0.91
SSBP4-207ENST00000600244 KIAA1217Q5T5P2 1943 aa20.72■□□□□ 0.91
SSBP4-207ENST00000600244 WDR87Q6ZQQ6 2873 aa20.71■□□□□ 0.91
SSBP4-207ENST00000600244 M0R2C6 588 aa20.71■□□□□ 0.91
SSBP4-207ENST00000600244 ITGB1P05556 798 aa20.71■□□□□ 0.91
SSBP4-207ENST00000600244 SLC3A2P08195 630 aaKnown RBP20.71■□□□□ 0.91
SSBP4-207ENST00000600244 STXBP2Q15833 593 aa20.71■□□□□ 0.91
SSBP4-207ENST00000600244 NAALADL2Q58DX5 795 aa20.71■□□□□ 0.91
SSBP4-207ENST00000600244 KBTBD3Q8NAB2 608 aa20.71■□□□□ 0.91
SSBP4-207ENST00000600244 TBC1D5Q92609 795 aa20.71■□□□□ 0.91
SSBP4-207ENST00000600244 IWS1Q96ST2 819 aa20.71■□□□□ 0.91
SSBP4-207ENST00000600244 C16orf70Q9BSU1 422 aa20.71■□□□□ 0.91
SSBP4-207ENST00000600244 MAF1Q9H063 256 aa20.71■□□□□ 0.91
SSBP4-207ENST00000600244 GPCPD1Q9NPB8 672 aa20.71■□□□□ 0.91
SSBP4-207ENST00000600244 C17orf102A2RUQ5 167 aa20.7■□□□□ 0.9
SSBP4-207ENST00000600244 TSPY2A6NKD2 308 aa20.7■□□□□ 0.9
SSBP4-207ENST00000600244 RNF113AO15541 343 aaKnown RBP20.7■□□□□ 0.9
SSBP4-207ENST00000600244 TREHO43280 583 aa20.7■□□□□ 0.9
SSBP4-207ENST00000600244 CTSHP09668 335 aa20.7■□□□□ 0.9
SSBP4-207ENST00000600244 BTG3Q14201 252 aaPredicted RBP20.7■□□□□ 0.9
SSBP4-207ENST00000600244 FAM26DQ5JW98 314 aa20.7■□□□□ 0.9
SSBP4-207ENST00000600244 SYTL5Q8TDW5 730 aaPredicted RBP20.7■□□□□ 0.9
SSBP4-207ENST00000600244 NSUN6Q8TEA1 469 aaKnown RBP20.7■□□□□ 0.9
SSBP4-207ENST00000600244 ATP8B4Q8TF62 1192 aa20.7■□□□□ 0.9
SSBP4-207ENST00000600244 COL20A1Q9P218 1284 aa20.7■□□□□ 0.9
SSBP4-207ENST00000600244 FRMPD2Q68DX3 1309 aaPredicted RBP20.7■□□□□ 0.9
SSBP4-207ENST00000600244 CACNA1GO43497 2377 aa20.7■□□□□ 0.9
SSBP4-207ENST00000600244 MYSM1Q5VVJ2 828 aa20.69■□□□□ 0.9
SSBP4-207ENST00000600244 RBM23Q86U06 439 aaKnown RBP20.69■□□□□ 0.9
SSBP4-207ENST00000600244 SIRT2Q8IXJ6 389 aa20.69■□□□□ 0.9
SSBP4-207ENST00000600244 DMXL1Q9Y485 3027 aa20.68■□□□□ 0.9
SSBP4-207ENST00000600244 EIF3JO75822 258 aaKnown RBP20.68■□□□□ 0.9
SSBP4-207ENST00000600244 DGKIO75912 1065 aa20.68■□□□□ 0.9
SSBP4-207ENST00000600244 HSDL1Q3SXM5 330 aa20.68■□□□□ 0.9
SSBP4-207ENST00000600244 DGLUCYQ7Z3D6 616 aa20.68■□□□□ 0.9
SSBP4-207ENST00000600244 NACAP1Q9BZK3 213 aa20.68■□□□□ 0.9
SSBP4-207ENST00000600244 RNPEPQ9H4A4 650 aa20.68■□□□□ 0.9
SSBP4-207ENST00000600244 DNAH14Q0VDD8 3507 aa20.68■□□□□ 0.9
SSBP4-207ENST00000600244 MYH7BA7E2Y1 1941 aa20.68■□□□□ 0.9
SSBP4-207ENST00000600244 ENPP3O14638 875 aa20.67■□□□□ 0.9
SSBP4-207ENST00000600244 KREMEN2Q8NCW0 462 aa20.67■□□□□ 0.9
SSBP4-207ENST00000600244 VN1R2Q8NFZ6 395 aa20.67■□□□□ 0.9
SSBP4-207ENST00000600244 POF1BQ8WVV4 589 aa20.67■□□□□ 0.9
SSBP4-207ENST00000600244 CNTNAP3BQ96NU0 1288 aa20.67■□□□□ 0.9
SSBP4-207ENST00000600244 CNTNAP3Q9BZ76 1288 aa20.67■□□□□ 0.9
SSBP4-207ENST00000600244 MRVI1Q9Y6F6 885 aa20.67■□□□□ 0.9
SSBP4-207ENST00000600244 MRPL42Q9Y6G3 142 aaKnown RBP20.67■□□□□ 0.9
SSBP4-207ENST00000600244 TTC3P53804 2025 aa20.66■□□□□ 0.9
SSBP4-207ENST00000600244 ZFYP08048 801 aaPredicted RBP20.66■□□□□ 0.9
SSBP4-207ENST00000600244 SMIM10L2AP0DMW4 78 aa20.66■□□□□ 0.9
SSBP4-207ENST00000600244 SMIM10L2BP0DMW5 78 aa20.66■□□□□ 0.9
SSBP4-207ENST00000600244 RBM10P98175 930 aaKnown RBP20.66■□□□□ 0.9
SSBP4-207ENST00000600244 ASTLQ6HA08 431 aaPredicted RBP20.66■□□□□ 0.9
SSBP4-207ENST00000600244 ZBTB33Q86T24 672 aa20.66■□□□□ 0.9
SSBP4-207ENST00000600244 UBALD2Q8IYN6 164 aa20.66■□□□□ 0.9
SSBP4-207ENST00000600244 KLHL23Q8NBE8 558 aa20.66■□□□□ 0.9
SSBP4-207ENST00000600244 RMDN3Q96TC7 470 aa20.66■□□□□ 0.9
SSBP4-207ENST00000600244 TMEM47Q9BQJ4 181 aa20.66■□□□□ 0.9
SSBP4-207ENST00000600244 NAPBQ9H115 298 aa20.66■□□□□ 0.9
SSBP4-207ENST00000600244 S1PR5Q9H228 398 aa20.66■□□□□ 0.9
SSBP4-207ENST00000600244 PCDHGC5Q9Y5F6 944 aa20.66■□□□□ 0.9
SSBP4-207ENST00000600244 PDHBP11177 359 aa20.65■□□□□ 0.9
SSBP4-207ENST00000600244 TOP1P11387 765 aaKnown RBP20.65■□□□□ 0.9
SSBP4-207ENST00000600244 USH1GQ495M9 461 aa20.65■□□□□ 0.9
SSBP4-207ENST00000600244 CELF3Q5SZQ8 465 aaKnown RBP20.65■□□□□ 0.9
SSBP4-207ENST00000600244 SPATA33Q96N06 139 aa20.65■□□□□ 0.9
SSBP4-207ENST00000600244 TLE6Q9H808 572 aa20.65■□□□□ 0.9
SSBP4-207ENST00000600244 EHMT1Q9H9B1 1298 aa20.65■□□□□ 0.9
SSBP4-207ENST00000600244 H3BRB1 525 aa20.64■□□□□ 0.89
SSBP4-207ENST00000600244 BRD1O95696 1058 aa20.64■□□□□ 0.89
SSBP4-207ENST00000600244 CLCN5P51795 746 aa20.64■□□□□ 0.89
SSBP4-207ENST00000600244 CTDSPL2Q05D32 466 aa20.64■□□□□ 0.89
SSBP4-207ENST00000600244 ZNF543Q08ER8 600 aa20.64■□□□□ 0.89
SSBP4-207ENST00000600244 CRIPAKQ8N1N5 446 aa20.64■□□□□ 0.89
SSBP4-207ENST00000600244 TUT1Q9H6E5 874 aaKnown RBP20.64■□□□□ 0.89
SSBP4-207ENST00000600244 SORCS3Q9UPU3 1222 aa20.64■□□□□ 0.89
SSBP4-207ENST00000600244 MYO10Q9HD67 2058 aa20.64■□□□□ 0.89
SSBP4-207ENST00000600244 ACACBO00763 2458 aa20.63■□□□□ 0.89
SSBP4-207ENST00000600244 PER2O15055 1255 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms