RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 CTDNEP1O95476 244 aa32.14■■■□□ 2.74
SSBP4-206ENST00000599699 TIMP1P01033 207 aa32.14■■■□□ 2.74
SSBP4-206ENST00000599699 HOXD8P13378 290 aaPredicted RBP32.14■■■□□ 2.74
SSBP4-206ENST00000599699 KCNA2P16389 499 aa32.14■■■□□ 2.74
SSBP4-206ENST00000599699 PSEN2P49810 448 aa32.14■■■□□ 2.74
SSBP4-206ENST00000599699 KIF2CQ99661 725 aa32.14■■■□□ 2.74
SSBP4-206ENST00000599699 PPP1R12CQ9BZL4 782 aa32.14■■■□□ 2.74
SSBP4-206ENST00000599699 KCNH7Q9NS40 1196 aa32.14■■■□□ 2.74
SSBP4-206ENST00000599699 ORC3Q9UBD5 711 aaPredicted RBP32.14■■■□□ 2.74
SSBP4-206ENST00000599699 LIMCH1Q9UPQ0 1083 aa32.14■■■□□ 2.74
SSBP4-206ENST00000599699 STK36Q9NRP7 1315 aa32.14■■■□□ 2.74
SSBP4-206ENST00000599699 SUPT20HL2P0C7V6 817 aa32.13■■■□□ 2.73
SSBP4-206ENST00000599699 XBP1P17861 261 aa32.13■■■□□ 2.73
SSBP4-206ENST00000599699 PTPN11Q06124 597 aaPredicted RBP32.13■■■□□ 2.73
SSBP4-206ENST00000599699 MFSD10Q14728 455 aa32.13■■■□□ 2.73
SSBP4-206ENST00000599699 PCDHA4Q9UN74 947 aa32.13■■■□□ 2.73
SSBP4-206ENST00000599699 TRIOBPQ9H2D6 2365 aa32.12■■■□□ 2.73
SSBP4-206ENST00000599699 A0A1W2PPC1 479 aa32.12■■■□□ 2.73
SSBP4-206ENST00000599699 F2P00734 622 aa32.12■■■□□ 2.73
SSBP4-206ENST00000599699 KIAA0753Q2KHM9 967 aa32.12■■■□□ 2.73
SSBP4-206ENST00000599699 C7orf31Q8N865 590 aa32.12■■■□□ 2.73
SSBP4-206ENST00000599699 WASF1Q92558 559 aa32.12■■■□□ 2.73
SSBP4-206ENST00000599699 GPR20Q99678 358 aa32.12■■■□□ 2.73
SSBP4-206ENST00000599699 NOD1Q9Y239 953 aa32.12■■■□□ 2.73
SSBP4-206ENST00000599699 RANBP2P49792 3224 aaKnown RBP32.12■■■□□ 2.73
SSBP4-206ENST00000599699 SCN10AQ9Y5Y9 1956 aa32.12■■■□□ 2.73
SSBP4-206ENST00000599699 BLIDQ8IZY5 108 aa32.11■■■□□ 2.73
SSBP4-206ENST00000599699 FAM177A1Q8N128 213 aaPredicted RBP32.11■■■□□ 2.73
SSBP4-206ENST00000599699 HIPK3Q9H422 1215 aa32.11■■■□□ 2.73
SSBP4-206ENST00000599699 MEIS1O00470 390 aa32.1■■■□□ 2.73
SSBP4-206ENST00000599699 LGALS2P05162 132 aa32.1■■■□□ 2.73
SSBP4-206ENST00000599699 CYP3A4P08684 503 aa32.1■■■□□ 2.73
SSBP4-206ENST00000599699 ARP10275 920 aa32.1■■■□□ 2.73
SSBP4-206ENST00000599699 FPGSQ05932 587 aa32.1■■■□□ 2.73
SSBP4-206ENST00000599699 UTP14CQ5TAP6 766 aaKnown RBP32.1■■■□□ 2.73
SSBP4-206ENST00000599699 TDHQ8IZJ6 230 aa32.1■■■□□ 2.73
SSBP4-206ENST00000599699 SDF4Q9BRK5 362 aa32.1■■■□□ 2.73
SSBP4-206ENST00000599699 KCNJ14Q9UNX9 436 aa32.1■■■□□ 2.73
SSBP4-206ENST00000599699 CYP2C9P11712 490 aa32.09■■■□□ 2.73
SSBP4-206ENST00000599699 GALNT17Q6IS24 598 aa32.09■■■□□ 2.73
SSBP4-206ENST00000599699 NIPA1Q7RTP0 329 aa32.09■■■□□ 2.73
SSBP4-206ENST00000599699 PLA2G4DQ86XP0 818 aa32.09■■■□□ 2.73
SSBP4-206ENST00000599699 C16orf70Q9BSU1 422 aa32.09■■■□□ 2.73
SSBP4-206ENST00000599699 TELO2Q9Y4R8 837 aa32.09■■■□□ 2.73
SSBP4-206ENST00000599699 LTBP2Q14767 1821 aa32.09■■■□□ 2.73
SSBP4-206ENST00000599699 FAM86B1E9PN63 330 aa32.08■■■□□ 2.73
SSBP4-206ENST00000599699 H3BRB1 525 aa32.08■■■□□ 2.73
SSBP4-206ENST00000599699 FAM86B2P0C5J1 330 aa32.08■■■□□ 2.73
SSBP4-206ENST00000599699 CYP2C18P33260 490 aa32.08■■■□□ 2.73
SSBP4-206ENST00000599699 RABEP1Q15276 862 aa32.08■■■□□ 2.73
SSBP4-206ENST00000599699 MFSD5Q6N075 450 aa32.08■■■□□ 2.73
SSBP4-206ENST00000599699 CRYGNQ8WXF5 182 aa32.08■■■□□ 2.73
SSBP4-206ENST00000599699 TUT1Q9H6E5 874 aaKnown RBP32.08■■■□□ 2.73
SSBP4-206ENST00000599699 AGO4Q9HCK5 861 aaKnown RBP32.08■■■□□ 2.73
SSBP4-206ENST00000599699 JPH1Q9HDC5 661 aaPredicted RBP32.08■■■□□ 2.73
SSBP4-206ENST00000599699 HDAC6Q9UBN7 1215 aa32.08■■■□□ 2.73
SSBP4-206ENST00000599699 HAS3O00219 553 aa32.07■■■□□ 2.72
SSBP4-206ENST00000599699 PTGISQ16647 500 aa32.07■■■□□ 2.72
SSBP4-206ENST00000599699 SESTD1Q86VW0 696 aa32.07■■■□□ 2.72
SSBP4-206ENST00000599699 TMEM199Q8N511 208 aa32.07■■■□□ 2.72
SSBP4-206ENST00000599699 DAGLBQ8NCG7 672 aa32.07■■■□□ 2.72
SSBP4-206ENST00000599699 NSUN7Q8NE18 718 aaKnown RBP32.07■■■□□ 2.72
SSBP4-206ENST00000599699 NOC4LQ9BVI4 516 aaKnown RBP32.07■■■□□ 2.72
SSBP4-206ENST00000599699 GDF6Q6KF10 455 aaPredicted RBP32.06■■■□□ 2.72
SSBP4-206ENST00000599699 SEPT1Q8WYJ6 367 aa32.06■■■□□ 2.72
SSBP4-206ENST00000599699 ZSCAN31Q96LW9 406 aaPredicted RBP32.06■■■□□ 2.72
SSBP4-206ENST00000599699 SLC9A2Q9UBY0 812 aa32.06■■■□□ 2.72
SSBP4-206ENST00000599699 ZNF215Q9UL58 517 aaPredicted RBP32.06■■■□□ 2.72
SSBP4-206ENST00000599699 JAK2O60674 1132 aa32.05■■■□□ 2.72
SSBP4-206ENST00000599699 TCF7P36402 384 aaPredicted RBP32.05■■■□□ 2.72
SSBP4-206ENST00000599699 TRIM50Q86XT4 487 aa32.05■■■□□ 2.72
SSBP4-206ENST00000599699 CCDC83Q8IWF9 413 aa32.05■■■□□ 2.72
SSBP4-206ENST00000599699 PHF20Q9BVI0 1012 aa32.05■■■□□ 2.72
SSBP4-206ENST00000599699 GJB4Q9NTQ9 266 aa32.05■■■□□ 2.72
SSBP4-206ENST00000599699 GTF2IRD1Q9UHL9 959 aa32.05■■■□□ 2.72
SSBP4-206ENST00000599699 DOCK5Q9H7D0 1870 aa32.05■■■□□ 2.72
SSBP4-206ENST00000599699 NFASCO94856 1347 aa32.04■■■□□ 2.72
SSBP4-206ENST00000599699 UMODL1Q5DID0 1318 aa32.04■■■□□ 2.72
SSBP4-206ENST00000599699 FDPSP14324 419 aaKnown RBP32.04■■■□□ 2.72
SSBP4-206ENST00000599699 CCL23P55773 120 aa32.04■■■□□ 2.72
SSBP4-206ENST00000599699 SETQ01105 290 aaPredicted RBP32.04■■■□□ 2.72
SSBP4-206ENST00000599699 ITGB3BPQ13352 177 aaPredicted RBP32.04■■■□□ 2.72
SSBP4-206ENST00000599699 PRR16Q569H4 304 aa32.04■■■□□ 2.72
SSBP4-206ENST00000599699 TBCKQ8TEA7 893 aa32.04■■■□□ 2.72
SSBP4-206ENST00000599699 UIMC1Q96RL1 719 aa32.04■■■□□ 2.72
SSBP4-206ENST00000599699 IGLV3-22A0A075B6J6 115 aa32.03■■■□□ 2.72
SSBP4-206ENST00000599699 ST18O60284 1047 aa32.03■■■□□ 2.72
SSBP4-206ENST00000599699 CSF2RAP15509 400 aa32.03■■■□□ 2.72
SSBP4-206ENST00000599699 PPIGQ13427 754 aaKnown RBP eCLIP32.03■■■□□ 2.723e-10■■■□□ 17.9
SSBP4-206ENST00000599699 NPY5RQ15761 445 aa32.03■■■□□ 2.72
SSBP4-206ENST00000599699 KRT25Q7Z3Z0 450 aa32.03■■■□□ 2.72
SSBP4-206ENST00000599699 ZNF577Q9BSK1 485 aa32.03■■■□□ 2.72
SSBP4-206ENST00000599699 GSTTP1A0A1W2PQM5 241 aa32.02■■■□□ 2.72
SSBP4-206ENST00000599699 DDX39AO00148 427 aaKnown RBP32.02■■■□□ 2.72
SSBP4-206ENST00000599699 CIITAP33076 1130 aa32.02■■■□□ 2.72
SSBP4-206ENST00000599699 USP11P51784 963 aa32.02■■■□□ 2.72
SSBP4-206ENST00000599699 ST3GAL1Q11201 340 aa32.02■■■□□ 2.72
SSBP4-206ENST00000599699 GLG1Q92896 1179 aa32.02■■■□□ 2.72
SSBP4-206ENST00000599699 SH2B1Q9NRF2 756 aaPredicted RBP32.02■■■□□ 2.72
SSBP4-206ENST00000599699 M0R2N6 131 aa32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms