RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 SPATA33Q96N06 139 aa14.66□□□□□ -0.06
SH2D3A-208ENST00000599563 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.66□□□□□ -0.06
SH2D3A-208ENST00000599563 MLXIPQ9HAP2 919 aa14.66□□□□□ -0.06
SH2D3A-208ENST00000599563 TRMT13Q9NUP7 481 aaKnown RBP14.66□□□□□ -0.06
SH2D3A-208ENST00000599563 MTMR10Q9NXD2 777 aa14.66□□□□□ -0.06
SH2D3A-208ENST00000599563 STK36Q9NRP7 1315 aa14.66□□□□□ -0.06
SH2D3A-208ENST00000599563 SPATA31C2B4DYI2 1134 aa14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 PARNO95453 639 aaKnown RBP14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 F2P00734 622 aa14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 FOSP01100 380 aaPredicted RBP14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 FGBP02675 491 aa14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 UBA1P22314 1058 aaKnown RBP14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 ANP32AP39687 249 aaKnown RBP14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 USP17L6PQ6QN14 398 aa14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 ZNF365Q70YC5 407 aa14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 C7orf31Q8N865 590 aa14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 CAGE1Q8TC20 777 aa14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 SENP7Q9BQF6 1050 aa14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 RNF26Q9BY78 433 aaPredicted RBP14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 V9GY48 417 aaPredicted RBP14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 TRIP12Q14669 1992 aaPredicted RBP14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 DOCK5Q9H7D0 1870 aa14.65□□□□□ -0.06
SH2D3A-208ENST00000599563 NOP56O00567 594 aaKnown RBP14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 PRPF3O43395 683 aaKnown RBP14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 PSEN2P49810 448 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 CHMP4BP1P59074 171 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 MRPS9P82933 396 aaKnown RBP14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 SSRP1Q08945 709 aaKnown RBP14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 PTGISQ16647 500 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 RASIP1Q5U651 963 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 WWC2Q6AWC2 1192 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 TYW1BQ6NUM6 668 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 METTL7BQ6UX53 244 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 HERVK_113Q902F9 699 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 KAT2BQ92831 832 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 GPRASP2Q96D09 838 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 GJB4Q9NTQ9 266 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 ORC3Q9UBD5 711 aaPredicted RBP14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 STXBP5LQ9Y2K9 1186 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 KAT6AQ92794 2004 aa14.64□□□□□ -0.07
SH2D3A-208ENST00000599563 HAS3O00219 553 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 MAFGO15525 162 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 CYP2C9P11712 490 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 ACTN1P12814 892 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 GJB2P29033 226 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 NAPAP54920 295 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 CCL23P55773 120 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 MFSD10Q14728 455 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 KIAA0753Q2KHM9 967 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 HSDL1Q3SXM5 330 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 MCTP2Q6DN12 878 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 CPLX2Q6PUV4 134 aaKnown RBP14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 Q7L0L9 218 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 C16orf59Q7L2K0 433 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 AFAP1L1Q8TED9 768 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 CCDC12Q8WUD4 166 aaPredicted RBP14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 LLPHQ9BRT6 129 aaKnown RBP14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 WNT8AQ9H1J5 351 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 GTF2IRD1Q9UHL9 959 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 UMODL1Q5DID0 1318 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 SCN5AQ14524 2016 aa14.63□□□□□ -0.07
SH2D3A-208ENST00000599563 ADAMTS3O15072 1205 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 CDKL5O76039 1030 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 ZNF286BP0CG31 522 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 ACRP10323 421 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 ADCY7P51828 1080 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 SP2Q02086 613 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 RBL2Q08999 1139 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 BECN1Q14457 450 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 PFKFB3Q16875 520 aaPredicted RBP14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 RIC8AQ9NPQ8 531 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 BARHL2Q9NY43 387 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 VPS54Q9P1Q0 977 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 ZNF215Q9UL58 517 aaPredicted RBP14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 SMC3Q9UQE7 1217 aa14.62□□□□□ -0.07
SH2D3A-208ENST00000599563 H3BRB1 525 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 STXBP3O00186 592 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 DEXIO95424 95 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 SCG2P13521 617 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 AKAP17AQ02040 695 aaKnown RBP14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 PTK7Q13308 1070 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 AP3B2Q13367 1082 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 RAB30Q15771 203 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 GDF6Q6KF10 455 aaPredicted RBP14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 TRIM22Q8IYM9 498 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 ALG1Q9BT22 464 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 TUT1Q9H6E5 874 aaKnown RBP14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 RTEL1Q9NZ71 1219 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 HDAC6Q9UBN7 1215 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 MSRAQ9UJ68 235 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 PCDHA6Q9UN73 950 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 PCDHA8Q9Y5H6 950 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 SLC4A7Q9Y6M7 1214 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 GBF1Q92538 1859 aa14.61□□□□□ -0.07
SH2D3A-208ENST00000599563 IQCF3P0C7M6 154 aa14.6□□□□□ -0.07
SH2D3A-208ENST00000599563 GNAT1P11488 350 aa14.6□□□□□ -0.07
SH2D3A-208ENST00000599563 SELPP16109 830 aa14.6□□□□□ -0.07
SH2D3A-208ENST00000599563 DNAJB2P25686 324 aa14.6□□□□□ -0.07
SH2D3A-208ENST00000599563 MTMR1Q13613 665 aa14.6□□□□□ -0.07
SH2D3A-208ENST00000599563 UBE2SQ16763 222 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms