RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ARHGAP1Q07960 439 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 MFSD10Q14728 455 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 PWP2Q15269 919 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 LY6KQ17RY6 165 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 KIAA0753Q2KHM9 967 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 RCSD1Q6JBY9 416 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 SEPT14Q6ZU15 432 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 FRMD5Q7Z6J6 570 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 DHX37Q8IY37 1157 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 ADSSL1Q8N142 457 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 TOP1MTQ969P6 601 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 MSLNLQ96KJ4 702 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 LMAN2LQ9H0V9 348 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 ZNF287Q9HBT7 754 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 STX8Q9UNK0 236 aa16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 USP15Q9Y4E8 981 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-218ENST00000598907 CTSHP09668 335 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 EDNRBP24530 442 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 NBL1P41271 181 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 TFAP4Q01664 338 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 ADAM15Q13444 863 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 ALX1Q15699 326 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 PLEKHG4Q58EX7 1191 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 ZBTB33Q86T24 672 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 SMRP1Q8NCR6 262 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 NEDD1Q8NHV4 660 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 SEPT8Q92599 483 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 NKD2Q969F2 451 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 USP26Q9BXU7 913 aa16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 BARX2Q9UMQ3 279 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-218ENST00000598907 LAMA4Q16363 1823 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 PLA2G6O60733 806 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 EYA4O95677 639 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 RPS6P62753 249 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 HIC1Q14526 733 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 CBX2Q14781 532 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 DGKDQ16760 1214 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 TTBK2Q6IQ55 1244 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 GIMAP6Q6P9H5 292 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 ADGRD2Q7Z7M1 963 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 IFNL3Q8IZI9 196 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 IL17RAQ96F46 866 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 KATNAL1Q9BW62 490 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 OSBPL7Q9BZF2 842 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 RANBP17Q9H2T7 1088 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 ANO2Q9NQ90 1003 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 CLEC1BQ9P126 229 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 GVINP1Q7Z2Y8 2422 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 ZMYM6O95789 1325 aa16.18■□□□□ 0.18
SHKBP1-218ENST00000598907 MMP1P03956 469 aa16.17■□□□□ 0.18
SHKBP1-218ENST00000598907 APPP05067 770 aa16.17■□□□□ 0.18
SHKBP1-218ENST00000598907 SP100P23497 879 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-218ENST00000598907 BMPR1AP36894 532 aa16.17■□□□□ 0.18
SHKBP1-218ENST00000598907 PTPN21Q16825 1174 aa16.17■□□□□ 0.18
SHKBP1-218ENST00000598907 CCDC62Q6P9F0 684 aa16.17■□□□□ 0.18
SHKBP1-218ENST00000598907 CLEC4DQ8WXI8 215 aa16.17■□□□□ 0.18
SHKBP1-218ENST00000598907 ADGRA3Q8IWK6 1321 aa16.17■□□□□ 0.18
SHKBP1-218ENST00000598907 C5orf67F2Z3F1 127 aa16.16■□□□□ 0.18
SHKBP1-218ENST00000598907 SORBS3O60504 671 aa16.16■□□□□ 0.18
SHKBP1-218ENST00000598907 NMT2O60551 498 aa16.16■□□□□ 0.18
SHKBP1-218ENST00000598907 F2P00734 622 aa16.16■□□□□ 0.18
SHKBP1-218ENST00000598907 FGAP02671 866 aa16.16■□□□□ 0.18
SHKBP1-218ENST00000598907 RB1P06400 928 aa16.16■□□□□ 0.18
SHKBP1-218ENST00000598907 NECTIN1Q15223 517 aa16.16■□□□□ 0.18
SHKBP1-218ENST00000598907 SYDE2Q5VT97 1194 aa16.16■□□□□ 0.18
SHKBP1-218ENST00000598907 RBM23Q86U06 439 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-218ENST00000598907 PHF7Q9BWX1 381 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-218ENST00000598907 FRMPD2Q68DX3 1309 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-218ENST00000598907 LINC00271P0C7V0 271 aa16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 ICAM3P32942 547 aa16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 NRIP1P48552 1158 aa16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 TMEM105Q8N8V8 129 aa16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 DNERQ8NFT8 737 aa16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 KCNB2Q92953 911 aa16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 PPP2R3CQ969Q6 453 aa16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 RIPOR3Q96MK2 946 aa16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 GPCPD1Q9NPB8 672 aa16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 RBM8AQ9Y5S9 174 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 EPG5Q9HCE0 2579 aa16.15■□□□□ 0.18
SHKBP1-218ENST00000598907 B4DLN1 442 aa16.14■□□□□ 0.17
SHKBP1-218ENST00000598907 HSPA4P34932 840 aa16.14■□□□□ 0.17
SHKBP1-218ENST00000598907 MRPL12P52815 198 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-218ENST00000598907 COASYQ13057 564 aa16.14■□□□□ 0.17
SHKBP1-218ENST00000598907 DGLUCYQ7Z3D6 616 aa16.14■□□□□ 0.17
SHKBP1-218ENST00000598907 SERINC5Q86VE9 423 aa16.14■□□□□ 0.17
SHKBP1-218ENST00000598907 EFHBQ8N7U6 833 aa16.14■□□□□ 0.17
SHKBP1-218ENST00000598907 NACAP1Q9BZK3 213 aa16.14■□□□□ 0.17
SHKBP1-218ENST00000598907 RWDD3Q9Y3V2 267 aa16.14■□□□□ 0.17
SHKBP1-218ENST00000598907 VPS13AQ96RL7 3174 aa16.14■□□□□ 0.17
SHKBP1-218ENST00000598907 HAS3O00219 553 aa16.13■□□□□ 0.17
SHKBP1-218ENST00000598907 GLP2RO95838 553 aa16.13■□□□□ 0.17
SHKBP1-218ENST00000598907 DNAJB1P25685 340 aa16.13■□□□□ 0.17
SHKBP1-218ENST00000598907 NUBP1P53384 320 aa16.13■□□□□ 0.17
SHKBP1-218ENST00000598907 CAMK1Q14012 370 aa16.13■□□□□ 0.17
SHKBP1-218ENST00000598907 BTG3Q14201 252 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-218ENST00000598907 RMDN1Q96DB5 314 aa16.13■□□□□ 0.17
SHKBP1-218ENST00000598907 CNTNAP3BQ96NU0 1288 aa16.13■□□□□ 0.17
SHKBP1-218ENST00000598907 CNTNAP3Q9BZ76 1288 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms