RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 KCNH7Q9NS40 1196 aa20.14■□□□□ 0.81
USHBP1-209ENST00000598570 ZMYND8Q9ULU4 1186 aaPredicted RBP20.14■□□□□ 0.81
USHBP1-209ENST00000598570 COLQQ9Y215 455 aaPredicted RBP20.14■□□□□ 0.81
USHBP1-209ENST00000598570 CYP3A7-CYP3A51PA0A087WV96 503 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 FAM86B1E9PN63 330 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 MYL3P08590 195 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 FAM86B2P0C5J1 330 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 CYP3A7P24462 503 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 ITGB8P26012 769 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 PSMC6P62333 389 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 MTMR1Q13613 665 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 BLIDQ8IZY5 108 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 MBOAT7Q96N66 472 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 CTAGE1Q96RT6 745 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 SH2B1Q9NRF2 756 aaPredicted RBP20.13■□□□□ 0.81
USHBP1-209ENST00000598570 DOCK5Q9H7D0 1870 aa20.13■□□□□ 0.81
USHBP1-209ENST00000598570 DHX15O43143 795 aaKnown RBP20.12■□□□□ 0.81
USHBP1-209ENST00000598570 PQBP1O60828 265 aaKnown RBP20.12■□□□□ 0.81
USHBP1-209ENST00000598570 MAGEA10P43363 369 aaPredicted RBP20.12■□□□□ 0.81
USHBP1-209ENST00000598570 NLRP5P59047 1200 aa20.12■□□□□ 0.81
USHBP1-209ENST00000598570 CYFIP1Q7L576 1253 aa20.12■□□□□ 0.81
USHBP1-209ENST00000598570 WASF1Q92558 559 aa20.12■□□□□ 0.81
USHBP1-209ENST00000598570 LENG9Q96B70 501 aa20.12■□□□□ 0.81
USHBP1-209ENST00000598570 PGBD1Q96JS3 809 aa20.12■□□□□ 0.81
USHBP1-209ENST00000598570 MLXIPQ9HAP2 919 aa20.12■□□□□ 0.81
USHBP1-209ENST00000598570 AGO4Q9HCK5 861 aaKnown RBP20.12■□□□□ 0.81
USHBP1-209ENST00000598570 ORC3Q9UBD5 711 aaPredicted RBP20.12■□□□□ 0.81
USHBP1-209ENST00000598570 ATG7O95352 703 aa20.11■□□□□ 0.81
USHBP1-209ENST00000598570 TIMP1P01033 207 aa20.11■□□□□ 0.81
USHBP1-209ENST00000598570 ARP10275 920 aa20.11■□□□□ 0.81
USHBP1-209ENST00000598570 SYN1P17600 705 aa20.11■□□□□ 0.81
USHBP1-209ENST00000598570 VTI1AQ96AJ9 217 aa20.11■□□□□ 0.81
USHBP1-209ENST00000598570 UPF2Q9HAU5 1272 aaKnown RBP20.11■□□□□ 0.81
USHBP1-209ENST00000598570 TELO2Q9Y4R8 837 aa20.11■□□□□ 0.81
USHBP1-209ENST00000598570 GSTTP1A0A1W2PQM5 241 aa20.1■□□□□ 0.81
USHBP1-209ENST00000598570 B4GALT4O60513 344 aa20.1■□□□□ 0.81
USHBP1-209ENST00000598570 ITGB3BPQ13352 177 aaPredicted RBP20.1■□□□□ 0.81
USHBP1-209ENST00000598570 MOXD1Q6UVY6 613 aa20.1■□□□□ 0.81
USHBP1-209ENST00000598570 TNFRSF25Q93038 417 aa20.1■□□□□ 0.81
USHBP1-209ENST00000598570 TRPV6Q9H1D0 765 aa20.1■□□□□ 0.81
USHBP1-209ENST00000598570 TMEM39AQ9NV64 488 aa20.1■□□□□ 0.81
USHBP1-209ENST00000598570 TLR3O15455 904 aaKnown RBP20.09■□□□□ 0.81
USHBP1-209ENST00000598570 LGR5O75473 907 aa20.09■□□□□ 0.81
USHBP1-209ENST00000598570 SUPT20HL2P0C7V6 817 aa20.09■□□□□ 0.81
USHBP1-209ENST00000598570 PSEN2P49810 448 aa20.09■□□□□ 0.81
USHBP1-209ENST00000598570 RBL2Q08999 1139 aa20.09■□□□□ 0.81
USHBP1-209ENST00000598570 CHRDL2Q6WN34 429 aa20.09■□□□□ 0.81
USHBP1-209ENST00000598570 RASGRP4Q8TDF6 673 aa20.09■□□□□ 0.81
USHBP1-209ENST00000598570 KATNAL1Q9BW62 490 aa20.09■□□□□ 0.81
USHBP1-209ENST00000598570 IGKV6D-21A0A0A0MT36 114 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 H3BRB1 525 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 JAK2O60674 1132 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 LGALS2P05162 132 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 MFSD10Q14728 455 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 HABP4Q5JVS0 413 aaKnown RBP20.08■□□□□ 0.81
USHBP1-209ENST00000598570 MFSD5Q6N075 450 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 SEPT1Q8WYJ6 367 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 ALG1Q9BT22 464 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 NOC4LQ9BVI4 516 aaKnown RBP20.08■□□□□ 0.81
USHBP1-209ENST00000598570 TUT1Q9H6E5 874 aaKnown RBP20.08■□□□□ 0.81
USHBP1-209ENST00000598570 GJB4Q9NTQ9 266 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 PRKAG2Q9UGJ0 569 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 GTF2IRD1Q9UHL9 959 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 KCNJ14Q9UNX9 436 aa20.08■□□□□ 0.81
USHBP1-209ENST00000598570 XBP1P17861 261 aa20.07■□□□□ 0.8
USHBP1-209ENST00000598570 ADAM17P78536 824 aa20.07■□□□□ 0.8
USHBP1-209ENST00000598570 SETQ01105 290 aaPredicted RBP20.07■□□□□ 0.8
USHBP1-209ENST00000598570 Q4G0T1 1027 aa20.07■□□□□ 0.8
USHBP1-209ENST00000598570 KRT25Q7Z3Z0 450 aa20.07■□□□□ 0.8
USHBP1-209ENST00000598570 VWCEQ96DN2 955 aa20.07■□□□□ 0.8
USHBP1-209ENST00000598570 MCM2P49736 904 aa20.06■□□□□ 0.8
USHBP1-209ENST00000598570 KIAA0753Q2KHM9 967 aa20.06■□□□□ 0.8
USHBP1-209ENST00000598570 PLA2G4DQ86XP0 818 aa20.06■□□□□ 0.8
USHBP1-209ENST00000598570 TBCKQ8TEA7 893 aa20.06■□□□□ 0.8
USHBP1-209ENST00000598570 BADQ92934 168 aa20.06■□□□□ 0.8
USHBP1-209ENST00000598570 PCYT2Q99447 389 aa20.06■□□□□ 0.8
USHBP1-209ENST00000598570 JPH1Q9HDC5 661 aaPredicted RBP20.06■□□□□ 0.8
USHBP1-209ENST00000598570 TBC1D22BQ9NU19 505 aa20.06■□□□□ 0.8
USHBP1-209ENST00000598570 TRMT13Q9NUP7 481 aaKnown RBP20.06■□□□□ 0.8
USHBP1-209ENST00000598570 SLC9A2Q9UBY0 812 aa20.06■□□□□ 0.8
USHBP1-209ENST00000598570 EMSYQ7Z589 1322 aa20.05■□□□□ 0.8
USHBP1-209ENST00000598570 IPO5O00410 1097 aaKnown RBP20.05■□□□□ 0.8
USHBP1-209ENST00000598570 PITPNM1O00562 1244 aa20.05■□□□□ 0.8
USHBP1-209ENST00000598570 NOP56O00567 594 aaKnown RBP20.05■□□□□ 0.8
USHBP1-209ENST00000598570 ST18O60284 1047 aa20.05■□□□□ 0.8
USHBP1-209ENST00000598570 CD2BP2O95400 341 aaKnown RBP20.05■□□□□ 0.8
USHBP1-209ENST00000598570 CCNE2O96020 404 aa20.05■□□□□ 0.8
USHBP1-209ENST00000598570 ZNF286BP0CG31 522 aa20.05■□□□□ 0.8
USHBP1-209ENST00000598570 RAG1P15918 1043 aa20.05■□□□□ 0.8
USHBP1-209ENST00000598570 HIC1Q14526 733 aa20.05■□□□□ 0.8
USHBP1-209ENST00000598570 PPP4R3AQ6IN85 833 aa20.05■□□□□ 0.8
USHBP1-209ENST00000598570 GDF6Q6KF10 455 aaPredicted RBP20.05■□□□□ 0.8
USHBP1-209ENST00000598570 B3GNT9Q6UX72 402 aa20.05■□□□□ 0.8
USHBP1-209ENST00000598570 OXER1Q8TDS5 423 aa20.05■□□□□ 0.8
USHBP1-209ENST00000598570 LBHD1Q9BQE6 289 aaPredicted RBP20.05■□□□□ 0.8
USHBP1-209ENST00000598570 HDAC6Q9UBN7 1215 aa20.05■□□□□ 0.8
USHBP1-209ENST00000598570 TRIP12Q14669 1992 aaPredicted RBP20.04■□□□□ 0.8
USHBP1-209ENST00000598570 DTNBO60941 627 aa20.04■□□□□ 0.8
USHBP1-209ENST00000598570 MMP1P03956 469 aa20.04■□□□□ 0.8
USHBP1-209ENST00000598570 TCF7P36402 384 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms