RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

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Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PPP1R13LQ8WUF5 828 aa14.94□□□□□ -0.02
USE1-207ENST00000596136 CRYGNQ8WXF5 182 aa14.94□□□□□ -0.02
USE1-207ENST00000596136 PHKBQ93100 1093 aa14.94□□□□□ -0.02
USE1-207ENST00000596136 RNPC3Q96LT9 517 aaKnown RBP14.94□□□□□ -0.02
USE1-207ENST00000596136 NCOA5Q9HCD5 579 aaKnown RBP14.94□□□□□ -0.02
USE1-207ENST00000596136 PDRG1Q9NUG6 133 aa14.94□□□□□ -0.02
USE1-207ENST00000596136 HDAC6Q9UBN7 1215 aa14.94□□□□□ -0.02
USE1-207ENST00000596136 H3BRB1 525 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 SORBS3O60504 671 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 LGALS2P05162 132 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 SREBF1P36956 1147 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 CCL23P55773 120 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 MTMR1Q13613 665 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 PTGISQ16647 500 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 ZNF365Q70YC5 407 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 C7orf31Q8N865 590 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 HERVK_113Q902F9 699 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 MXRA8Q9BRK3 442 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 ANO3Q9BYT9 981 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 TUT1Q9H6E5 874 aaKnown RBP14.93□□□□□ -0.02
USE1-207ENST00000596136 SH3GLB2Q9NR46 395 aa14.93□□□□□ -0.02
USE1-207ENST00000596136 MEIS1O00470 390 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 NOP56O00567 594 aaKnown RBP14.92□□□□□ -0.02
USE1-207ENST00000596136 CYP3A4P08684 503 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 IQCF3P0C7M6 154 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 ACRP10323 421 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 GNA11P29992 359 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 RFC2P35250 354 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 AKAP17AQ02040 695 aaKnown RBP14.92□□□□□ -0.02
USE1-207ENST00000596136 BFSP2Q13515 415 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 CEP55Q53EZ4 464 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 NIPA1Q7RTP0 329 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 RPUSD2Q8IZ73 545 aaKnown RBP14.92□□□□□ -0.02
USE1-207ENST00000596136 CYP2W1Q8TAV3 490 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 CAGE1Q8TC20 777 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 DHX38Q92620 1227 aaKnown RBP14.92□□□□□ -0.02
USE1-207ENST00000596136 ALG1Q9BT22 464 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 SLC26A6Q9BXS9 759 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 C6orf50Q9HD87 102 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 KCNH7Q9NS40 1196 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 TMEM260Q9NX78 707 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 TELO2Q9Y4R8 837 aa14.92□□□□□ -0.02
USE1-207ENST00000596136 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.91□□□□□ -0.02
USE1-207ENST00000596136 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.91□□□□□ -0.02
USE1-207ENST00000596136 ADAMTS3O15072 1205 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 SEC24BO95487 1268 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 FGBP02675 491 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 PFKMP08237 780 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 CHMP4BP1P59074 171 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 PTK7Q13308 1070 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 HIC1Q14526 733 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 FAM177A1Q8N128 213 aaPredicted RBP14.91□□□□□ -0.02
USE1-207ENST00000596136 DEFB123Q8N688 67 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 TET1Q8NFU7 2136 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 AFAP1L1Q8TED9 768 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 SCLYQ96I15 445 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 PGBD1Q96JS3 809 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 MTMR10Q9NXD2 777 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 NOD1Q9Y239 953 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 SCN5AQ14524 2016 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 NFASCO94856 1347 aa14.91□□□□□ -0.02
USE1-207ENST00000596136 GSTTP1A0A1W2PQM5 241 aa14.9□□□□□ -0.02
USE1-207ENST00000596136 ARHGAP4P98171 946 aa14.9□□□□□ -0.02
USE1-207ENST00000596136 SSRP1Q08945 709 aaKnown RBP14.9□□□□□ -0.02
USE1-207ENST00000596136 TRIM71Q2Q1W2 868 aaKnown RBP14.9□□□□□ -0.02
USE1-207ENST00000596136 JAKMIP3Q5VZ66 844 aa14.9□□□□□ -0.02
USE1-207ENST00000596136 TRIM22Q8IYM9 498 aa14.9□□□□□ -0.02
USE1-207ENST00000596136 REXO1Q8N1G1 1221 aaKnown RBP14.9□□□□□ -0.02
USE1-207ENST00000596136 CCDC155Q8N6L0 562 aa14.9□□□□□ -0.02
USE1-207ENST00000596136 RETREG2Q8NC44 543 aa14.9□□□□□ -0.02
USE1-207ENST00000596136 CCDC148Q8NFR7 591 aa14.9□□□□□ -0.02
USE1-207ENST00000596136 BICD2Q8TD16 824 aa14.9□□□□□ -0.02
USE1-207ENST00000596136 SEPT1Q8WYJ6 367 aa14.9□□□□□ -0.02
USE1-207ENST00000596136 LARP6Q9BRS8 491 aaKnown RBP14.9□□□□□ -0.02
USE1-207ENST00000596136 TANC1Q9C0D5 1861 aa14.9□□□□□ -0.02
USE1-207ENST00000596136 COL6A3P12111 3177 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 KAT6AQ92794 2004 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 IGLV3-22A0A075B6J6 115 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 CPLX1O14810 134 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 PFKFB2O60825 505 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 DEXIO95424 95 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 PARNO95453 639 aaKnown RBP14.89□□□□□ -0.03
USE1-207ENST00000596136 SMIM10L2AP0DMW4 78 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 SMIM10L2BP0DMW5 78 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 ARP10275 920 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 TCF7P36402 384 aaPredicted RBP14.89□□□□□ -0.03
USE1-207ENST00000596136 ADAM17P78536 824 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 ZNF200P98182 395 aaPredicted RBP14.89□□□□□ -0.03
USE1-207ENST00000596136 SCRN1Q12765 414 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 GPNMBQ14956 572 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 ANKRD1Q15327 319 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 CPLX2Q6PUV4 134 aaKnown RBP14.89□□□□□ -0.03
USE1-207ENST00000596136 Q7L0L9 218 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 SERINC5Q86VE9 423 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 RNPEPQ9H4A4 650 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 AGO4Q9HCK5 861 aaKnown RBP14.89□□□□□ -0.03
USE1-207ENST00000596136 TPCN1Q9ULQ1 816 aa14.89□□□□□ -0.03
USE1-207ENST00000596136 TMEM265A0A087WTH1 108 aa14.88□□□□□ -0.03
USE1-207ENST00000596136 FAM86B1E9PN63 330 aa14.88□□□□□ -0.03
USE1-207ENST00000596136 PPFIA3O75145 1194 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms