RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 PAGR1Q9BTK6 254 aa18.12■□□□□ 0.49
SIN3B-206ENST00000595541 TMEM59LQ9UK28 342 aa18.12■□□□□ 0.49
SIN3B-206ENST00000595541 NFS1Q9Y697 457 aa18.12■□□□□ 0.49
SIN3B-206ENST00000595541 ATXN2Q99700 1313 aaKnown RBP18.12■□□□□ 0.49
SIN3B-206ENST00000595541 LOC102724428A0A0B4J2F2 783 aa18.12■□□□□ 0.49
SIN3B-206ENST00000595541 E7EVH7 732 aa18.12■□□□□ 0.49
SIN3B-206ENST00000595541 SIK1P57059 783 aa18.12■□□□□ 0.49
SIN3B-206ENST00000595541 C6orf89Q6UWU4 347 aa18.12■□□□□ 0.49
SIN3B-206ENST00000595541 CABS1Q96KC9 395 aa18.12■□□□□ 0.49
SIN3B-206ENST00000595541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.12■□□□□ 0.49
SIN3B-206ENST00000595541 TMBIM4Q9HC24 238 aa18.12■□□□□ 0.49
SIN3B-206ENST00000595541 RNF14Q9UBS8 474 aa18.12■□□□□ 0.49
SIN3B-206ENST00000595541 ATP6V0A2Q9Y487 856 aa18.12■□□□□ 0.49
SIN3B-206ENST00000595541 ABCB11O95342 1321 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 SERPING1P05155 500 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 HSD17B3P37058 310 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 HSPA9P38646 679 aaKnown RBP18.11■□□□□ 0.49
SIN3B-206ENST00000595541 FAM133AQ8N9E0 248 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 JPH2Q9BR39 696 aaPredicted RBP18.11■□□□□ 0.49
SIN3B-206ENST00000595541 CEP72Q9P209 647 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 TSKSQ9UJT2 592 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 A6NNZ2 444 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 TRAF5O00463 557 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 TMOD1P28289 359 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 SF3B2Q13435 895 aaKnown RBP18.11■□□□□ 0.49
SIN3B-206ENST00000595541 SLC18A3Q16572 532 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 QPCTQ16769 361 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 TUBB8Q3ZCM7 444 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 CHADLQ6NUI6 762 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 TGFBRAP1Q8WUH2 860 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 RAD54LQ92698 747 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 DNAJC19Q96DA6 116 aa18.11■□□□□ 0.49
SIN3B-206ENST00000595541 RAPGEF1Q13905 1077 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 ZNF444Q8N0Y2 327 aaPredicted RBP18.1■□□□□ 0.49
SIN3B-206ENST00000595541 C6orf50Q9HD87 102 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 COL4A3BPQ9Y5P4 624 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 LAMB2P55268 1798 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 DCDC2CA8MYV0 355 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 FAM107AO95990 144 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 HSPA2P54652 639 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 CALCRLQ16602 461 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 CCDC91Q7Z6B0 441 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 DZIP1Q86YF9 867 aaKnown RBP18.1■□□□□ 0.49
SIN3B-206ENST00000595541 CCDC13Q8IYE1 715 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 WHAMMQ8TF30 809 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 SPZ1Q9BXG8 430 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 AP1M1Q9BXS5 423 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 EDEM3Q9BZQ6 932 aa18.1■□□□□ 0.49
SIN3B-206ENST00000595541 KCNK3O14649 394 aa18.09■□□□□ 0.49
SIN3B-206ENST00000595541 KCNQ4P56696 695 aa18.09■□□□□ 0.49
SIN3B-206ENST00000595541 CACNB1Q02641 598 aaPredicted RBP18.09■□□□□ 0.49
SIN3B-206ENST00000595541 HLTFQ14527 1009 aaKnown RBP eCLIP18.09■□□□□ 0.49
SIN3B-206ENST00000595541 YTHDF3Q7Z739 585 aaKnown RBP18.09■□□□□ 0.49
SIN3B-206ENST00000595541 NELFCDQ8IXH7 590 aa18.09■□□□□ 0.49
SIN3B-206ENST00000595541 TAF1DQ9H5J8 278 aaPredicted RBP18.09■□□□□ 0.49
SIN3B-206ENST00000595541 STK17AQ9UEE5 414 aa18.09■□□□□ 0.49
SIN3B-206ENST00000595541 CNOT8Q9UFF9 292 aaKnown RBP18.09■□□□□ 0.49
SIN3B-206ENST00000595541 ACTN3Q08043 901 aaPredicted RBP18.09■□□□□ 0.49
SIN3B-206ENST00000595541 CCDC40Q4G0X9 1142 aa18.09■□□□□ 0.49
SIN3B-206ENST00000595541 MAPKAPK5Q8IW41 473 aa18.09■□□□□ 0.49
SIN3B-206ENST00000595541 REXO1Q8N1G1 1221 aaKnown RBP18.09■□□□□ 0.49
SIN3B-206ENST00000595541 SNX29Q8TEQ0 813 aa18.09■□□□□ 0.49
SIN3B-206ENST00000595541 COA7Q96BR5 231 aa18.09■□□□□ 0.49
SIN3B-206ENST00000595541 CYFIP2Q96F07 1278 aa18.09■□□□□ 0.49
SIN3B-206ENST00000595541 SLC12A6Q9UHW9 1150 aa18.09■□□□□ 0.49
SIN3B-206ENST00000595541 HMGB1P1B2RPK0 211 aaPredicted RBP18.08■□□□□ 0.49
SIN3B-206ENST00000595541 ACTN1P12814 892 aa18.08■□□□□ 0.49
SIN3B-206ENST00000595541 COASYQ13057 564 aa18.08■□□□□ 0.49
SIN3B-206ENST00000595541 MYOCDQ8IZQ8 938 aa18.08■□□□□ 0.49
SIN3B-206ENST00000595541 ISCUQ9H1K1 167 aa18.08■□□□□ 0.49
SIN3B-206ENST00000595541 VCPKMTQ9H867 229 aa18.08■□□□□ 0.49
SIN3B-206ENST00000595541 PLCB1Q9NQ66 1216 aa18.08■□□□□ 0.49
SIN3B-206ENST00000595541 FGFR1OPO95684 399 aaKnown RBP18.08■□□□□ 0.48
SIN3B-206ENST00000595541 ZBTB48P10074 688 aaPredicted RBP18.08■□□□□ 0.48
SIN3B-206ENST00000595541 GNA11P29992 359 aa18.08■□□□□ 0.48
SIN3B-206ENST00000595541 FXR2P51116 673 aaKnown RBP eCLIP18.08■□□□□ 0.48
SIN3B-206ENST00000595541 RPS8P62241 208 aaKnown RBP18.08■□□□□ 0.48
SIN3B-206ENST00000595541 FKBP3Q00688 224 aaKnown RBP18.08■□□□□ 0.48
SIN3B-206ENST00000595541 ZNF844Q08AG5 666 aa18.08■□□□□ 0.48
SIN3B-206ENST00000595541 CDK5RAP3Q96JB5 506 aa18.08■□□□□ 0.48
SIN3B-206ENST00000595541 OSBPL7Q9BZF2 842 aa18.08■□□□□ 0.48
SIN3B-206ENST00000595541 NPHP3-ACAD11A0A0J9YXS1 232 aa18.08■□□□□ 0.48
SIN3B-206ENST00000595541 DNM1LO00429 736 aa18.08■□□□□ 0.48
SIN3B-206ENST00000595541 RASSF9O75901 435 aa18.08■□□□□ 0.48
SIN3B-206ENST00000595541 KLHL30Q0D2K2 578 aa18.08■□□□□ 0.48
SIN3B-206ENST00000595541 SCFD2Q8WU76 684 aa18.08■□□□□ 0.48
SIN3B-206ENST00000595541 SYN2Q92777 582 aaPredicted RBP18.08■□□□□ 0.48
SIN3B-206ENST00000595541 DDX47Q9H0S4 455 aaKnown RBP18.08■□□□□ 0.48
SIN3B-206ENST00000595541 DDX20Q9UHI6 824 aaKnown RBP18.08■□□□□ 0.48
SIN3B-206ENST00000595541 ITGA4P13612 1032 aa18.07■□□□□ 0.48
SIN3B-206ENST00000595541 PTK2Q05397 1052 aa18.07■□□□□ 0.48
SIN3B-206ENST00000595541 TRIM59Q8IWR1 403 aa18.07■□□□□ 0.48
SIN3B-206ENST00000595541 C1orf131Q8NDD1 294 aaKnown RBP18.07■□□□□ 0.48
SIN3B-206ENST00000595541 ZKSCAN4Q969J2 545 aaPredicted RBP18.07■□□□□ 0.48
SIN3B-206ENST00000595541 CXorf56Q9H5V9 222 aa18.07■□□□□ 0.48
SIN3B-206ENST00000595541 USP17L5A8MUK1 530 aa18.07■□□□□ 0.48
SIN3B-206ENST00000595541 DDR1Q08345 913 aa18.07■□□□□ 0.48
SIN3B-206ENST00000595541 BYSLQ13895 437 aaKnown RBP18.07■□□□□ 0.48
SIN3B-206ENST00000595541 SPATS2Q86XZ4 545 aaKnown RBP18.07■□□□□ 0.48
SIN3B-206ENST00000595541 GANQ9H2C0 597 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms