RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 WDR87Q6ZQQ6 2873 aa14.87□□□□□ -0.03
SCAF1-202ENST00000595242 LAMA4Q16363 1823 aa14.87□□□□□ -0.03
SCAF1-202ENST00000595242 CACNA1BQ00975 2339 aa14.87□□□□□ -0.03
SCAF1-202ENST00000595242 TMX3Q96JJ7 454 aa14.87□□□□□ -0.03
SCAF1-202ENST00000595242 ALG1Q9BT22 464 aa14.87□□□□□ -0.03
SCAF1-202ENST00000595242 IGFLR1Q9H665 355 aa14.87□□□□□ -0.03
SCAF1-202ENST00000595242 EPB41L4AQ9HCS5 686 aaPredicted RBP14.87□□□□□ -0.03
SCAF1-202ENST00000595242 STX8Q9UNK0 236 aa14.87□□□□□ -0.03
SCAF1-202ENST00000595242 B4DLN1 442 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 H0Y858 1186 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 APPP05067 770 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 AVPR2P30518 371 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 GTF2F1P35269 517 aaKnown RBP eCLIP14.86□□□□□ -0.031e-6■■□□□ 13.3
SCAF1-202ENST00000595242 MRPL12P52815 198 aaKnown RBP14.86□□□□□ -0.03
SCAF1-202ENST00000595242 RPS6P62753 249 aaKnown RBP14.86□□□□□ -0.03
SCAF1-202ENST00000595242 ARHGAP1Q07960 439 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 MCMDC2Q4G0Z9 681 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 PLEKHG4Q58EX7 1191 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 ZMYM1Q5SVZ6 1142 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 CREB3L3Q68CJ9 461 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 CCDC62Q6P9F0 684 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 CHST3Q7LGC8 479 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 ASCL5Q7RTU5 278 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 ZNF589Q86UQ0 364 aaPredicted RBP14.86□□□□□ -0.03
SCAF1-202ENST00000595242 DNERQ8NFT8 737 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 CLEC4DQ8WXI8 215 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 ZSWIM6Q9HCJ5 1215 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 TLR9Q9NR96 1032 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 MTMR7Q9Y216 660 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 KIAA1671Q9BY89 1806 aa14.86□□□□□ -0.03
SCAF1-202ENST00000595242 LOC730098B7Z3J9 87 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 PROB1E7EW31 1015 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 SLC27A2O14975 620 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 GRM6O15303 877 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 LINC01565O15544 149 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 GH1P01241 217 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 MCM4P33991 863 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 CTNNB1P35222 781 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 SLC16A2P36021 539 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 PSEN2P49810 448 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 NUCB2P80303 420 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 ZNF200P98182 395 aaPredicted RBP14.85□□□□□ -0.03
SCAF1-202ENST00000595242 SIGLEC14Q08ET2 396 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 DGKDQ16760 1214 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 LY6KQ17RY6 165 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 RNF20Q5VTR2 975 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 KATNAL1Q9BW62 490 aa14.85□□□□□ -0.03
SCAF1-202ENST00000595242 RSPH10B2B2RC85 870 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 C5orf67F2Z3F1 127 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 ZFYP08048 801 aaPredicted RBP14.84□□□□□ -0.03
SCAF1-202ENST00000595242 RSPH10BP0C881 870 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 THPOP40225 353 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 ADAM15Q13444 863 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 MFSD10Q14728 455 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 KIAA0753Q2KHM9 967 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 CCDC96Q2M329 555 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 PPP4R3BQ5MIZ7 849 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 VPS53Q5VIR6 699 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 TTBK2Q6IQ55 1244 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 SEPT14Q6ZU15 432 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 OSBP2Q969R2 916 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 C11orf84Q9BUA3 381 aaPredicted RBP14.84□□□□□ -0.03
SCAF1-202ENST00000595242 DSCC1Q9BVC3 393 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 LMAN2LQ9H0V9 348 aa14.84□□□□□ -0.03
SCAF1-202ENST00000595242 U3KPZ7 1027 aaPredicted RBP14.84□□□□□ -0.03
SCAF1-202ENST00000595242 RNF113AO15541 343 aaKnown RBP14.83□□□□□ -0.04
SCAF1-202ENST00000595242 GPAA1O43292 621 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 NMT2O60551 498 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 EYA4O95677 639 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 RB1P06400 928 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 GNAT2P19087 354 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 PSMA5P28066 241 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 NDUFV1P49821 464 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 HIC1Q14526 733 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 DHX37Q8IY37 1157 aaKnown RBP14.83□□□□□ -0.04
SCAF1-202ENST00000595242 IFNL3Q8IZI9 196 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 FIBCD1Q8N539 461 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 SEPT8Q92599 483 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 TNPO1Q92973 898 aaKnown RBP14.83□□□□□ -0.04
SCAF1-202ENST00000595242 ASIC4Q96FT7 647 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 MSLNLQ96KJ4 702 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 IFIH1Q9BYX4 1025 aaKnown RBP14.83□□□□□ -0.04
SCAF1-202ENST00000595242 IL17RBQ9NRM6 502 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 TRPC6Q9Y210 931 aa14.83□□□□□ -0.04
SCAF1-202ENST00000595242 DMXL1Q9Y485 3027 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 GVINP1Q7Z2Y8 2422 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 TTC3P53804 2025 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.82□□□□□ -0.04
SCAF1-202ENST00000595242 PRR23AA6NEV1 266 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 DDX11L8A8MPP1 907 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 PATL2C9JE40 543 aaKnown RBP14.82□□□□□ -0.04
SCAF1-202ENST00000595242 HAS3O00219 553 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 CSPG5O95196 566 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 F2P00734 622 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 SLC3A2P08195 630 aaKnown RBP14.82□□□□□ -0.04
SCAF1-202ENST00000595242 ZNF286BP0CG31 522 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 BMPR1AP36894 532 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 ID4P47928 161 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 KRT32Q14532 448 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 CBX2Q14781 532 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms