RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 PRDM5Q9NQX1 630 aaPredicted RBP24.99■■□□□ 1.59
HOMER3-206ENST00000594439 KCNH7Q9NS40 1196 aa24.99■■□□□ 1.59
HOMER3-206ENST00000594439 TELO2Q9Y4R8 837 aa24.99■■□□□ 1.59
HOMER3-206ENST00000594439 KIAA0355O15063 1070 aa24.98■■□□□ 1.59
HOMER3-206ENST00000594439 CD4P01730 458 aa24.98■■□□□ 1.59
HOMER3-206ENST00000594439 ARP10275 920 aa24.98■■□□□ 1.59
HOMER3-206ENST00000594439 ZNF76P36508 570 aa24.98■■□□□ 1.59
HOMER3-206ENST00000594439 CHRDL2Q6WN34 429 aa24.98■■□□□ 1.59
HOMER3-206ENST00000594439 NIPA1Q7RTP0 329 aa24.98■■□□□ 1.59
HOMER3-206ENST00000594439 IL27Q8NEV9 243 aa24.98■■□□□ 1.59
HOMER3-206ENST00000594439 PRO3102Q9H379 93 aa24.98■■□□□ 1.59
HOMER3-206ENST00000594439 SH2B1Q9NRF2 756 aaPredicted RBP24.98■■□□□ 1.59
HOMER3-206ENST00000594439 PKD2L1Q9P0L9 805 aa24.98■■□□□ 1.59
HOMER3-206ENST00000594439 PRKAG2Q9UGJ0 569 aa24.98■■□□□ 1.59
HOMER3-206ENST00000594439 IGLV3-22A0A075B6J6 115 aa24.97■■□□□ 1.59
HOMER3-206ENST00000594439 FAM86B1E9PN63 330 aa24.97■■□□□ 1.59
HOMER3-206ENST00000594439 EDIL3O43854 480 aa24.97■■□□□ 1.59
HOMER3-206ENST00000594439 ST18O60284 1047 aa24.97■■□□□ 1.59
HOMER3-206ENST00000594439 FAM86B2P0C5J1 330 aa24.97■■□□□ 1.59
HOMER3-206ENST00000594439 ZNF286BP0CG31 522 aa24.97■■□□□ 1.59
HOMER3-206ENST00000594439 XBP1P17861 261 aa24.97■■□□□ 1.59
HOMER3-206ENST00000594439 MAGEA10P43363 369 aaPredicted RBP24.97■■□□□ 1.59
HOMER3-206ENST00000594439 PPP1R13LQ8WUF5 828 aa24.97■■□□□ 1.59
HOMER3-206ENST00000594439 GPR20Q99678 358 aa24.97■■□□□ 1.59
HOMER3-206ENST00000594439 GDF15Q99988 308 aa24.97■■□□□ 1.59
HOMER3-206ENST00000594439 TBX21Q9UL17 535 aa24.97■■□□□ 1.59
HOMER3-206ENST00000594439 TLR3O15455 904 aaKnown RBP24.96■■□□□ 1.59
HOMER3-206ENST00000594439 F2P00734 622 aa24.96■■□□□ 1.59
HOMER3-206ENST00000594439 NFRKBQ6P4R8 1299 aa24.96■■□□□ 1.59
HOMER3-206ENST00000594439 LLPHQ9BRT6 129 aaKnown RBP24.96■■□□□ 1.59
HOMER3-206ENST00000594439 C16orf70Q9BSU1 422 aa24.96■■□□□ 1.59
HOMER3-206ENST00000594439 TMEM39AQ9NV64 488 aa24.96■■□□□ 1.59
HOMER3-206ENST00000594439 COLQQ9Y215 455 aaPredicted RBP24.96■■□□□ 1.59
HOMER3-206ENST00000594439 HAS3O00219 553 aa24.95■■□□□ 1.58
HOMER3-206ENST00000594439 NOP56O00567 594 aaKnown RBP24.95■■□□□ 1.58
HOMER3-206ENST00000594439 CIITAP33076 1130 aa24.95■■□□□ 1.58
HOMER3-206ENST00000594439 PSEN2P49810 448 aa24.95■■□□□ 1.58
HOMER3-206ENST00000594439 PLA2G4DQ86XP0 818 aa24.95■■□□□ 1.58
HOMER3-206ENST00000594439 TRPV6Q9H1D0 765 aa24.95■■□□□ 1.58
HOMER3-206ENST00000594439 AGO4Q9HCK5 861 aaKnown RBP24.95■■□□□ 1.58
HOMER3-206ENST00000594439 NFASCO94856 1347 aa24.94■■□□□ 1.58
HOMER3-206ENST00000594439 B4GALT4O60513 344 aa24.94■■□□□ 1.58
HOMER3-206ENST00000594439 CD2BP2O95400 341 aaKnown RBP24.94■■□□□ 1.58
HOMER3-206ENST00000594439 ITGB8P26012 769 aa24.94■■□□□ 1.58
HOMER3-206ENST00000594439 MDM2Q00987 491 aaPredicted RBP24.94■■□□□ 1.58
HOMER3-206ENST00000594439 SP4Q02446 784 aa24.94■■□□□ 1.58
HOMER3-206ENST00000594439 PTPN11Q06124 597 aaPredicted RBP24.94■■□□□ 1.58
HOMER3-206ENST00000594439 ITGB3BPQ13352 177 aaPredicted RBP24.94■■□□□ 1.58
HOMER3-206ENST00000594439 TBCKQ8TEA7 893 aa24.94■■□□□ 1.58
HOMER3-206ENST00000594439 KATNAL1Q9BW62 490 aa24.94■■□□□ 1.58
HOMER3-206ENST00000594439 LGALS2P05162 132 aa24.93■■□□□ 1.58
HOMER3-206ENST00000594439 USP11P51784 963 aa24.93■■□□□ 1.58
HOMER3-206ENST00000594439 CHMP4BP1P59074 171 aa24.93■■□□□ 1.58
HOMER3-206ENST00000594439 MFSD10Q14728 455 aa24.93■■□□□ 1.58
HOMER3-206ENST00000594439 FAM47CQ5HY64 1035 aa24.93■■□□□ 1.58
HOMER3-206ENST00000594439 SESTD1Q86VW0 696 aa24.93■■□□□ 1.58
HOMER3-206ENST00000594439 OXER1Q8TDS5 423 aa24.93■■□□□ 1.58
HOMER3-206ENST00000594439 TRMT13Q9NUP7 481 aaKnown RBP24.93■■□□□ 1.58
HOMER3-206ENST00000594439 GSTTP1A0A1W2PQM5 241 aa24.92■■□□□ 1.58
HOMER3-206ENST00000594439 BMP8BP34820 402 aa24.92■■□□□ 1.58
HOMER3-206ENST00000594439 KIAA0753Q2KHM9 967 aa24.92■■□□□ 1.58
HOMER3-206ENST00000594439 KRT25Q7Z3Z0 450 aa24.92■■□□□ 1.58
HOMER3-206ENST00000594439 LENG9Q96B70 501 aa24.92■■□□□ 1.58
HOMER3-206ENST00000594439 LBHD1Q9BQE6 289 aaPredicted RBP24.92■■□□□ 1.58
HOMER3-206ENST00000594439 JPH1Q9HDC5 661 aaPredicted RBP24.92■■□□□ 1.58
HOMER3-206ENST00000594439 RAG1P15918 1043 aa24.91■■□□□ 1.58
HOMER3-206ENST00000594439 SETQ01105 290 aaPredicted RBP24.91■■□□□ 1.58
HOMER3-206ENST00000594439 NONOQ15233 471 aaKnown RBP eCLIP24.91■■□□□ 1.58
HOMER3-206ENST00000594439 BADQ92934 168 aa24.91■■□□□ 1.58
HOMER3-206ENST00000594439 SDF4Q9BRK5 362 aa24.91■■□□□ 1.58
HOMER3-206ENST00000594439 HDAC6Q9UBN7 1215 aa24.91■■□□□ 1.58
HOMER3-206ENST00000594439 SLC9A2Q9UBY0 812 aa24.91■■□□□ 1.58
HOMER3-206ENST00000594439 H3BRB1 525 aa24.9■■□□□ 1.58
HOMER3-206ENST00000594439 TIMP1P01033 207 aa24.9■■□□□ 1.58
HOMER3-206ENST00000594439 TCF7P36402 384 aaPredicted RBP24.9■■□□□ 1.58
HOMER3-206ENST00000594439 FOSBP53539 338 aa24.9■■□□□ 1.58
HOMER3-206ENST00000594439 PRR16Q569H4 304 aa24.9■■□□□ 1.58
HOMER3-206ENST00000594439 UTP14CQ5TAP6 766 aaKnown RBP24.9■■□□□ 1.58
HOMER3-206ENST00000594439 TRIM50Q86XT4 487 aa24.9■■□□□ 1.58
HOMER3-206ENST00000594439 SEPT1Q8WYJ6 367 aa24.9■■□□□ 1.58
HOMER3-206ENST00000594439 TMX3Q96JJ7 454 aa24.9■■□□□ 1.58
HOMER3-206ENST00000594439 TUT1Q9H6E5 874 aaKnown RBP24.9■■□□□ 1.58
HOMER3-206ENST00000594439 DHX15O43143 795 aaKnown RBP24.89■■□□□ 1.58
HOMER3-206ENST00000594439 MMP1P03956 469 aa24.89■■□□□ 1.58
HOMER3-206ENST00000594439 SUPT20HL2P0C7V6 817 aa24.89■■□□□ 1.58
HOMER3-206ENST00000594439 KRT2P35908 639 aa24.89■■□□□ 1.58
HOMER3-206ENST00000594439 MCM2P49736 904 aa24.89■■□□□ 1.58
HOMER3-206ENST00000594439 HMGN5P82970 282 aaKnown RBP24.89■■□□□ 1.58
HOMER3-206ENST00000594439 INF2Q27J81 1249 aa24.89■■□□□ 1.58
HOMER3-206ENST00000594439 KRT40Q6A162 431 aa24.89■■□□□ 1.58
HOMER3-206ENST00000594439 GDF6Q6KF10 455 aaPredicted RBP24.89■■□□□ 1.58
HOMER3-206ENST00000594439 TNFRSF25Q93038 417 aa24.89■■□□□ 1.58
HOMER3-206ENST00000594439 UIMC1Q96RL1 719 aa24.89■■□□□ 1.58
HOMER3-206ENST00000594439 GTF2IRD1Q9UHL9 959 aa24.89■■□□□ 1.58
HOMER3-206ENST00000594439 TRIP12Q14669 1992 aaPredicted RBP24.88■■□□□ 1.57
HOMER3-206ENST00000594439 CYP3A7-CYP3A51PA0A087WV96 503 aa24.88■■□□□ 1.57
HOMER3-206ENST00000594439 CCDC194A0A1B0GVG4 234 aa24.88■■□□□ 1.57
HOMER3-206ENST00000594439 IPO5O00410 1097 aaKnown RBP24.88■■□□□ 1.57
HOMER3-206ENST00000594439 CYP3A7P24462 503 aa24.88■■□□□ 1.57
HOMER3-206ENST00000594439 EARS2Q5JPH6 523 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms