RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PHLDB3Q6NSJ2 640 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 CES5AQ6NT32 575 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 TATDN1Q6P1N9 297 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 SLC4A10Q6U841 1118 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 TMEM184AQ6ZMB5 413 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 TBC1D9Q6ZT07 1266 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 KIAA1211Q6ZU35 1233 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 ERICH6Q7L0X2 663 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.78□□□□□ -1.8
VRK3-204ENST00000593912 CPXCR1Q8N123 301 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 ANKRD35Q8N283 1001 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 PLCD3Q8N3E9 789 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 TSPYL6Q8N831 410 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 C12orf50Q8NA57 414 aaPredicted RBP3.78□□□□□ -1.8
VRK3-204ENST00000593912 LINS1Q8NG48 757 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 OR6J1Q8NGC5 347 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 DNAAF4Q8WXU2 420 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 LPIN2Q92539 896 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 COPS5Q92905 334 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 P2RX5Q93086 422 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 NSUN4Q96CB9 384 aaKnown RBP3.78□□□□□ -1.8
VRK3-204ENST00000593912 KAZALD1Q96I82 304 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 NECTIN4Q96NY8 510 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 MYL10Q9BUA6 226 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 PLVAPQ9BX97 442 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 ADAM7Q9H2U9 754 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 HOMER2Q9NSB8 354 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 TRIM35Q9UPQ4 493 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 MSRB2Q9Y3D2 182 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 NEUROG3Q9Y4Z2 214 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 CACNA1FO60840 1977 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 IL16Q14005 1332 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 FRMPD2Q68DX3 1309 aaPredicted RBP3.77□□□□□ -1.81
VRK3-204ENST00000593912 ENO4A6NNW6 628 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 HIDE1A8MVS5 230 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 F6X3S4 739 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 MPHOSPH10O00566 681 aaKnown RBP3.77□□□□□ -1.81
VRK3-204ENST00000593912 SEMA3EO15041 775 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 ATXN7O15265 892 aaPredicted RBP3.77□□□□□ -1.81
VRK3-204ENST00000593912 N4BP1O75113 896 aaKnown RBP3.77□□□□□ -1.81
VRK3-204ENST00000593912 HLA-DOAP06340 250 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 SRGAP2BP0DMP2 458 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 HOXB8P17481 243 aaPredicted RBP3.77□□□□□ -1.81
VRK3-204ENST00000593912 POU3F2P20265 443 aaPredicted RBP3.77□□□□□ -1.81
VRK3-204ENST00000593912 CD72P21854 359 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 SHMT1P34896 483 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 MTHFRP42898 656 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 CPT1AP50416 773 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 GATMP50440 423 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 LMOD3Q0VAK6 560 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 SIM2Q14190 667 aaPredicted RBP3.77□□□□□ -1.81
VRK3-204ENST00000593912 HIC1Q14526 733 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 UBXN2BQ14CS0 331 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 DUSP28Q4G0W2 176 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 CCDC30Q5VVM6 783 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 IQSEC1Q6DN90 963 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 TCEAL6Q6IPX3 200 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 KIAA1841Q6NSI8 718 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 XRRA1Q6P2D8 792 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 DCLRE1AQ6PJP8 1040 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 PI16Q6UXB8 463 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 MDM1Q8TC05 714 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 TCEAL3Q969E4 200 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 ZNF689Q96CS4 500 aaPredicted RBP3.77□□□□□ -1.81
VRK3-204ENST00000593912 BORCS6Q96GS4 357 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 CDCA3Q99618 268 aaPredicted RBP3.77□□□□□ -1.81
VRK3-204ENST00000593912 TEX13BQ9BXU2 312 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 BCO2Q9BYV7 579 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 ARRDC1-AS1Q9H2J1 176 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 RAVER2Q9HCJ3 691 aaKnown RBP3.77□□□□□ -1.81
VRK3-204ENST00000593912 CABP5Q9NP86 173 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 GNL3LQ9NVN8 582 aaKnown RBP3.77□□□□□ -1.81
VRK3-204ENST00000593912 HCSTQ9UBK5 93 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 HDAC6Q9UBN7 1215 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 PPP1R9AQ9ULJ8 1098 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 USTQ9Y2C2 406 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 Q9Y3F1 56 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 PAXBP1Q9Y5B6 917 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 MYH8P13535 1937 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 MYH15Q9Y2K3 1946 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 TTC3P53804 2025 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 LRBAP50851 2863 aa3.77□□□□□ -1.81
VRK3-204ENST00000593912 EMSYQ7Z589 1322 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 PLXNB3Q9ULL4 1909 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 FLNCQ14315 2725 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 URB1O60287 2271 aaKnown RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 RSPH10B2B2RC85 870 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 TK2O00142 265 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 GRM8O00222 908 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 FSCN2O14926 492 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 AXIN1O15169 862 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 HRO43593 1189 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 RAD21O60216 631 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 MAFO75444 373 aaPredicted RBP3.76□□□□□ -1.81
VRK3-204ENST00000593912 WISP1O95388 367 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 CTSHP09668 335 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 RSPH10BP0C881 870 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 SRFP11831 508 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 TDGF1P13385 188 aa3.76□□□□□ -1.81
VRK3-204ENST00000593912 COPB2P35606 906 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms