RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 ZNF507Q8TCN5 953 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 CHURC1Q8WUH1 139 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 CDK5RAP3Q96JB5 506 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 EXOC1Q9NV70 894 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 MAGEC2Q9UBF1 373 aaPredicted RBP15.86■□□□□ 0.13
RANBP3-229ENST00000592771 PCDHA12Q9UN75 941 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 BCS1LQ9Y276 419 aa15.86■□□□□ 0.13
RANBP3-229ENST00000592771 LUC7L2Q9Y383 392 aaKnown RBP15.86■□□□□ 0.13
RANBP3-229ENST00000592771 PVALEFA0A1B0GWK0 134 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 MYMKA6NI61 221 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 NDUFA10O95299 355 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 CYP3A4P08684 503 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 PDE4DQ08499 809 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 MCM6Q14566 821 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 RASA3Q14644 834 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 TTI2Q6NXR4 508 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 FAM160B2Q86V87 743 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 IRF2BP1Q8IU81 584 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 FAM114A1Q8IWE2 563 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 SLFN12Q8IYM2 578 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 LENG9Q96B70 501 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 RPGRIP1Q96KN7 1286 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 MYO6Q9UM54 1294 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 MAPK8IP1Q9UQF2 711 aa15.85■□□□□ 0.13
RANBP3-229ENST00000592771 KDM3AQ9Y4C1 1321 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 BICDL2A1A5D9 508 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 SPDYE3A6NKU9 549 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 COBLO75128 1261 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 PMS1P54277 932 aaKnown RBP15.84■□□□□ 0.13
RANBP3-229ENST00000592771 AMPD2Q01433 879 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 TNFAIP1Q13829 316 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 ECM1Q16610 540 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 WDR93Q6P2C0 686 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 UNC13DQ70J99 1090 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 KCNK18Q7Z418 384 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 LRRC27Q9C0I9 530 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 ACBD3Q9H3P7 528 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 GINM1Q9NU53 330 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.84■□□□□ 0.13
RANBP3-229ENST00000592771 L1RE1Q9UN81 338 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 POLR3GO15318 223 aaPredicted RBP15.84■□□□□ 0.13
RANBP3-229ENST00000592771 EGFRP00533 1210 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 TAL1P17542 331 aaPredicted RBP15.84■□□□□ 0.13
RANBP3-229ENST00000592771 EHHADHQ08426 723 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 STK4Q13043 487 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 MEA1Q16626 185 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 MUM1L1Q5H9M0 696 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
RANBP3-229ENST00000592771 FEM1BQ9UK73 627 aa15.84■□□□□ 0.13
RANBP3-229ENST00000592771 TRIM49BA6NDI0 452 aa15.83■□□□□ 0.12
RANBP3-229ENST00000592771 FZD9O00144 591 aa15.83■□□□□ 0.12
RANBP3-229ENST00000592771 CCNE1P24864 410 aa15.83■□□□□ 0.12
RANBP3-229ENST00000592771 PRELPP51888 382 aa15.83■□□□□ 0.12
RANBP3-229ENST00000592771 SPIRE1Q08AE8 756 aa15.83■□□□□ 0.12
RANBP3-229ENST00000592771 CCDC170Q8IYT3 715 aa15.83■□□□□ 0.12
RANBP3-229ENST00000592771 KIAA0895Q8NCT3 520 aa15.83■□□□□ 0.12
RANBP3-229ENST00000592771 GJA10Q969M2 543 aa15.83■□□□□ 0.12
RANBP3-229ENST00000592771 DUSP9Q99956 384 aaKnown RBP15.83■□□□□ 0.12
RANBP3-229ENST00000592771 SYT17Q9BSW7 474 aa15.83■□□□□ 0.12
RANBP3-229ENST00000592771 GLIS2Q9BZE0 524 aaPredicted RBP15.83■□□□□ 0.12
RANBP3-229ENST00000592771 NT5C3AQ9H0P0 336 aa15.83■□□□□ 0.12
RANBP3-229ENST00000592771 TTC26A0AVF1 554 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 MARCH6O60337 910 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 CYLC1P35663 651 aaPredicted RBP15.82■□□□□ 0.12
RANBP3-229ENST00000592771 GMPSP49915 693 aaPredicted RBP15.82■□□□□ 0.12
RANBP3-229ENST00000592771 CDK17Q00537 523 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 FIGNQ5HY92 759 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 TRAPPC11Q7Z392 1133 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 P2RX5Q93086 422 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 FAM20AQ96MK3 541 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 SLF1Q9BQI6 1058 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 DEFB129Q9H1M3 183 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 A0A0U1RQJ8 604 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 FAM86B1E9PN63 330 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 RNF225M0QZC1 329 aaPredicted RBP15.82■□□□□ 0.12
RANBP3-229ENST00000592771 FAM86B2P0C5J1 330 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 FCER1AP12319 257 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 ATRIPQ8WXE1 791 aa15.82■□□□□ 0.12
RANBP3-229ENST00000592771 ZNHIT6Q9NWK9 470 aaKnown RBP15.82■□□□□ 0.12
RANBP3-229ENST00000592771 A0A1W2PQJ5 194 aa15.81■□□□□ 0.12
RANBP3-229ENST00000592771 ERICH4A6NGS2 130 aa15.81■□□□□ 0.12
RANBP3-229ENST00000592771 KRT86O43790 486 aa15.81■□□□□ 0.12
RANBP3-229ENST00000592771 HOXA13P31271 388 aaPredicted RBP15.81■□□□□ 0.12
RANBP3-229ENST00000592771 CKAP4Q07065 602 aaKnown RBP15.81■□□□□ 0.12
RANBP3-229ENST00000592771 PRR16Q569H4 304 aa15.81■□□□□ 0.12
RANBP3-229ENST00000592771 PAPD7Q5XG87 772 aaKnown RBP15.81■□□□□ 0.12
RANBP3-229ENST00000592771 MICALL2Q8IY33 904 aa15.81■□□□□ 0.12
RANBP3-229ENST00000592771 DNAJC19Q96DA6 116 aa15.81■□□□□ 0.12
RANBP3-229ENST00000592771 TRIM47Q96LD4 638 aa15.81■□□□□ 0.12
RANBP3-229ENST00000592771 ZSWIM4Q9H7M6 989 aa15.81■□□□□ 0.12
RANBP3-229ENST00000592771 VIPAS39Q9H9C1 493 aa15.81■□□□□ 0.12
RANBP3-229ENST00000592771 UTRNP46939 3433 aa15.81■□□□□ 0.12
RANBP3-229ENST00000592771 ANO9A1A5B4 782 aa15.8■□□□□ 0.12
RANBP3-229ENST00000592771 ZBED6P86452 979 aa15.8■□□□□ 0.12
RANBP3-229ENST00000592771 RASSF7Q02833 373 aa15.8■□□□□ 0.12
RANBP3-229ENST00000592771 CENPPQ6IPU0 288 aa15.8■□□□□ 0.12
RANBP3-229ENST00000592771 FOXR2Q6PJQ5 311 aa15.8■□□□□ 0.12
RANBP3-229ENST00000592771 DDX12PQ92771 950 aa15.8■□□□□ 0.12
RANBP3-229ENST00000592771 PNKPQ96T60 521 aa15.8■□□□□ 0.12
RANBP3-229ENST00000592771 MRPL11Q9Y3B7 192 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms