RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 UBIAD1Q9Y5Z9 338 aa17.4■□□□□ 0.38
ERCC1-213ENST00000592023 PITPNM1O00562 1244 aa17.39■□□□□ 0.37
ERCC1-213ENST00000592023 FGBP02675 491 aa17.39■□□□□ 0.37
ERCC1-213ENST00000592023 PDIA3P30101 505 aaKnown RBP17.39■□□□□ 0.37
ERCC1-213ENST00000592023 AKAP17AQ02040 695 aaKnown RBP17.39■□□□□ 0.37
ERCC1-213ENST00000592023 RASIP1Q5U651 963 aa17.39■□□□□ 0.37
ERCC1-213ENST00000592023 CCDC155Q8N6L0 562 aa17.39■□□□□ 0.37
ERCC1-213ENST00000592023 HERVK_113Q902F9 699 aa17.39■□□□□ 0.37
ERCC1-213ENST00000592023 DHX38Q92620 1227 aaKnown RBP17.39■□□□□ 0.37
ERCC1-213ENST00000592023 CDHR1Q96JP9 859 aa17.39■□□□□ 0.37
ERCC1-213ENST00000592023 LARP6Q9BRS8 491 aaKnown RBP17.39■□□□□ 0.37
ERCC1-213ENST00000592023 SLC26A6Q9BXS9 759 aa17.39■□□□□ 0.37
ERCC1-213ENST00000592023 TM6SF1Q9BZW5 370 aa17.39■□□□□ 0.37
ERCC1-213ENST00000592023 MTIF3Q9H2K0 278 aaKnown RBP17.39■□□□□ 0.37
ERCC1-213ENST00000592023 CXXC1Q9P0U4 656 aaPredicted RBP17.39■□□□□ 0.37
ERCC1-213ENST00000592023 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.38■□□□□ 0.37
ERCC1-213ENST00000592023 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.38■□□□□ 0.37
ERCC1-213ENST00000592023 H3BRB1 525 aa17.38■□□□□ 0.37
ERCC1-213ENST00000592023 PRPF3O43395 683 aaKnown RBP17.38■□□□□ 0.37
ERCC1-213ENST00000592023 ATP9AO75110 1047 aa17.38■□□□□ 0.37
ERCC1-213ENST00000592023 KCNA2P16389 499 aa17.38■□□□□ 0.37
ERCC1-213ENST00000592023 ZNF200P98182 395 aaPredicted RBP17.38■□□□□ 0.37
ERCC1-213ENST00000592023 AP3B2Q13367 1082 aa17.38■□□□□ 0.37
ERCC1-213ENST00000592023 PKN1Q16512 942 aa17.38■□□□□ 0.37
ERCC1-213ENST00000592023 UTP14CQ5TAP6 766 aaKnown RBP17.38■□□□□ 0.37
ERCC1-213ENST00000592023 RPUSD2Q8IZ73 545 aaKnown RBP17.38■□□□□ 0.37
ERCC1-213ENST00000592023 CAGE1Q8TC20 777 aa17.38■□□□□ 0.37
ERCC1-213ENST00000592023 VWCEQ96DN2 955 aa17.38■□□□□ 0.37
ERCC1-213ENST00000592023 SENP7Q9BQF6 1050 aa17.38■□□□□ 0.37
ERCC1-213ENST00000592023 RNF26Q9BY78 433 aaPredicted RBP17.38■□□□□ 0.37
ERCC1-213ENST00000592023 TUT1Q9H6E5 874 aaKnown RBP17.38■□□□□ 0.37
ERCC1-213ENST00000592023 JADE2Q9NQC1 790 aa17.38■□□□□ 0.37
ERCC1-213ENST00000592023 ZBBXA8MT70 800 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 GRXCR1A8MXD5 290 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 FOSP01100 380 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-213ENST00000592023 PFKMP08237 780 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 IQCF3P0C7M6 154 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 DNAJB2P25686 324 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 CLK2P49760 499 aaKnown RBP17.37■□□□□ 0.37
ERCC1-213ENST00000592023 EVCP57679 992 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 HIC1Q14526 733 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 NTRK3Q16288 839 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 JAKMIP3Q5VZ66 844 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 TEX2Q8IWB9 1127 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 GIMAP8Q8ND71 665 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-213ENST00000592023 AFAP1L1Q8TED9 768 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 CCDC12Q8WUD4 166 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-213ENST00000592023 GUCD1Q96NT3 240 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 GLT8D2Q9H1C3 349 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 PDRG1Q9NUG6 133 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 ZNF215Q9UL58 517 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-213ENST00000592023 GBF1Q92538 1859 aa17.37■□□□□ 0.37
ERCC1-213ENST00000592023 ESYT2A0FGR8 921 aa17.36■□□□□ 0.37
ERCC1-213ENST00000592023 ADAMTS3O15072 1205 aa17.36■□□□□ 0.37
ERCC1-213ENST00000592023 SMIM10L2AP0DMW4 78 aa17.36■□□□□ 0.37
ERCC1-213ENST00000592023 SMIM10L2BP0DMW5 78 aa17.36■□□□□ 0.37
ERCC1-213ENST00000592023 IFNAR1P17181 557 aa17.36■□□□□ 0.37
ERCC1-213ENST00000592023 RFC2P35250 354 aa17.36■□□□□ 0.37
ERCC1-213ENST00000592023 TCF7P36402 384 aaPredicted RBP17.36■□□□□ 0.37
ERCC1-213ENST00000592023 SREBF1P36956 1147 aa17.36■□□□□ 0.37
ERCC1-213ENST00000592023 STK3Q13188 491 aa17.36■□□□□ 0.37
ERCC1-213ENST00000592023 LRRC8DQ7L1W4 858 aa17.36■□□□□ 0.37
ERCC1-213ENST00000592023 WNT8BQ93098 351 aa17.36■□□□□ 0.37
ERCC1-213ENST00000592023 MXRA8Q9BRK3 442 aa17.36■□□□□ 0.37
ERCC1-213ENST00000592023 TTYH1Q9H313 450 aaPredicted RBP17.36■□□□□ 0.37
ERCC1-213ENST00000592023 TRIP12Q14669 1992 aaPredicted RBP17.35■□□□□ 0.37
ERCC1-213ENST00000592023 C17orf102A2RUQ5 167 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 SELPP16109 830 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 PBX2P40425 430 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 ARHGAP4P98171 946 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 RBL2Q08999 1139 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 PTK7Q13308 1070 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 REXO1Q8N1G1 1221 aaKnown RBP17.35■□□□□ 0.37
ERCC1-213ENST00000592023 CCDC148Q8NFR7 591 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 CYP2W1Q8TAV3 490 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 PBX4Q9BYU1 374 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 FTOQ9C0B1 505 aaKnown RBP eCLIP17.35■□□□□ 0.37
ERCC1-213ENST00000592023 ZMYND12Q9H0C1 365 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 C6orf50Q9HD87 102 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 KCNH7Q9NS40 1196 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 VPS54Q9P1Q0 977 aa17.35■□□□□ 0.37
ERCC1-213ENST00000592023 CPLX1O14810 134 aa17.34■□□□□ 0.37
ERCC1-213ENST00000592023 CKBP12277 381 aa17.34■□□□□ 0.37
ERCC1-213ENST00000592023 ZNF76P36508 570 aa17.34■□□□□ 0.37
ERCC1-213ENST00000592023 CEP55Q53EZ4 464 aa17.34■□□□□ 0.37
ERCC1-213ENST00000592023 TRIM22Q8IYM9 498 aa17.34■□□□□ 0.37
ERCC1-213ENST00000592023 RASGRP4Q8TDF6 673 aa17.34■□□□□ 0.37
ERCC1-213ENST00000592023 TIFAQ96CG3 184 aa17.34■□□□□ 0.37
ERCC1-213ENST00000592023 JPH1Q9HDC5 661 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-213ENST00000592023 STXBP5LQ9Y2K9 1186 aa17.34■□□□□ 0.37
ERCC1-213ENST00000592023 TMEM265A0A087WTH1 108 aa17.33■□□□□ 0.36
ERCC1-213ENST00000592023 RBAK-RBAKDNI3L0D1 243 aa17.33■□□□□ 0.36
ERCC1-213ENST00000592023 MAFGO15525 162 aa17.33■□□□□ 0.36
ERCC1-213ENST00000592023 ARP10275 920 aa17.33■□□□□ 0.36
ERCC1-213ENST00000592023 ACTN1P12814 892 aa17.33■□□□□ 0.36
ERCC1-213ENST00000592023 MARK3P27448 753 aa17.33■□□□□ 0.36
ERCC1-213ENST00000592023 TRIM71Q2Q1W2 868 aaKnown RBP17.33■□□□□ 0.36
ERCC1-213ENST00000592023 ATP6V0A1Q93050 837 aa17.33■□□□□ 0.36
ERCC1-213ENST00000592023 ZNF274Q96GC6 653 aaPredicted RBP17.33■□□□□ 0.36
ERCC1-213ENST00000592023 SDF4Q9BRK5 362 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms