RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 CCDC12Q8WUD4 166 aaPredicted RBP15.94■□□□□ 0.14
CLIP3-205ENST00000592017 SPATA33Q96N06 139 aa15.94■□□□□ 0.14
CLIP3-205ENST00000592017 INPP4AQ96PE3 977 aaPredicted RBP15.94■□□□□ 0.14
CLIP3-205ENST00000592017 TMEM260Q9NX78 707 aa15.94■□□□□ 0.14
CLIP3-205ENST00000592017 HAS3O00219 553 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 PPFIA4O75335 1185 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 F2P00734 622 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 DNAJB2P25686 324 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 ICAM3P32942 547 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 SCRN1Q12765 414 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 PTGISQ16647 500 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 RPUSD2Q8IZ73 545 aaKnown RBP15.93■□□□□ 0.14
CLIP3-205ENST00000592017 IL17RAQ96F46 866 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 ANO3Q9BYT9 981 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 GLT8D2Q9H1C3 349 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 VPS54Q9P1Q0 977 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 HDAC6Q9UBN7 1215 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 TELO2Q9Y4R8 837 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 SCN10AQ9Y5Y9 1956 aa15.93■□□□□ 0.14
CLIP3-205ENST00000592017 CDH23Q9H251 3354 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 FIBPO43427 364 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 DTNBO60941 627 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 IQCF3P0C7M6 154 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 MFSD10Q14728 455 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 KIAA0753Q2KHM9 967 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 JAKMIP3Q5VZ66 844 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 XRRA1Q6P2D8 792 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 DEFB128Q7Z7B8 93 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 NLRX1Q86UT6 975 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 CCDC148Q8NFR7 591 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 DHX38Q92620 1227 aaKnown RBP15.92■□□□□ 0.14
CLIP3-205ENST00000592017 C16orf70Q9BSU1 422 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 ALG1Q9BT22 464 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 PBX4Q9BYU1 374 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 MLXIPQ9HAP2 919 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 C6orf50Q9HD87 102 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 NOD1Q9Y239 953 aa15.92■□□□□ 0.14
CLIP3-205ENST00000592017 ESYT2A0FGR8 921 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 RBAK-RBAKDNI3L0D1 243 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 PITPNM1O00562 1244 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 PFKFB2O60825 505 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 CDKL5O76039 1030 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 DEXIO95424 95 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 LARGE1O95461 756 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 FOSP01100 380 aaPredicted RBP15.91■□□□□ 0.14
CLIP3-205ENST00000592017 SP4Q02446 784 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 AP3B2Q13367 1082 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 HIC1Q14526 733 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 GPNMBQ14956 572 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 C7orf31Q8N865 590 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 NECAB1Q8N987 351 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 RETREG2Q8NC44 543 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 SLC17A8Q8NDX2 589 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 MYLIPQ8WY64 445 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 TIFAQ96CG3 184 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 C22orf23Q9BZE7 217 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 ZMYND12Q9H0C1 365 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 PKD2L1Q9P0L9 805 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 GTF2IRD1Q9UHL9 959 aa15.91■□□□□ 0.14
CLIP3-205ENST00000592017 TMEM265A0A087WTH1 108 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 ADAMTS3O15072 1205 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 ITGB5P18084 799 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 GNA11P29992 359 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 CLK2P49760 499 aaKnown RBP15.9■□□□□ 0.14
CLIP3-205ENST00000592017 NLRP5P59047 1200 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 ZNF200P98182 395 aaPredicted RBP15.9■□□□□ 0.14
CLIP3-205ENST00000592017 BFSP2Q13515 415 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 MTMR1Q13613 665 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 GRIN2CQ14957 1233 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 METTL7BQ6UX53 244 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 CYFIP1Q7L576 1253 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 REXO1Q8N1G1 1221 aaKnown RBP15.9■□□□□ 0.14
CLIP3-205ENST00000592017 RASGRP4Q8TDF6 673 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 GPRASP2Q96D09 838 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 AIFM3Q96NN9 605 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 KATNAL1Q9BW62 490 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 UPF2Q9HAU5 1272 aaKnown RBP15.9■□□□□ 0.14
CLIP3-205ENST00000592017 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 CHD9Q3L8U1 2897 aa15.9■□□□□ 0.14
CLIP3-205ENST00000592017 NOP56O00567 594 aaKnown RBP15.89■□□□□ 0.13
CLIP3-205ENST00000592017 RFC2P35250 354 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 SREBF1P36956 1147 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 NEDD9Q14511 834 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 ME3Q16798 604 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 TEX2Q8IWB9 1127 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 WNT8BQ93098 351 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 CDHR1Q96JP9 859 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 GPR20Q99678 358 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 MTIF3Q9H2K0 278 aaKnown RBP15.89■□□□□ 0.13
CLIP3-205ENST00000592017 ZNF576Q9H609 170 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 JADE2Q9NQC1 790 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 UBIAD1Q9Y5Z9 338 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 SLC4A7Q9Y6M7 1214 aa15.89■□□□□ 0.13
CLIP3-205ENST00000592017 ATP9AO75110 1047 aa15.88■□□□□ 0.13
CLIP3-205ENST00000592017 PFKMP08237 780 aa15.88■□□□□ 0.13
CLIP3-205ENST00000592017 ZNF76P36508 570 aa15.88■□□□□ 0.13
CLIP3-205ENST00000592017 RABGGTBP53611 331 aa15.88■□□□□ 0.13
CLIP3-205ENST00000592017 ARHGAP4P98171 946 aa15.88■□□□□ 0.13
CLIP3-205ENST00000592017 TRIM71Q2Q1W2 868 aaKnown RBP15.88■□□□□ 0.13
CLIP3-205ENST00000592017 TRAF7Q6Q0C0 670 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms