RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 BTNL9Q6UXG8 535 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 HEATR3Q7Z4Q2 680 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 NBPF11Q86T75 865 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 FBXO11Q86XK2 927 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 CCDC116Q8IYX3 515 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 NECAB1Q8N987 351 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 FANCBQ8NB91 859 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 REPS2Q8NFH8 660 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 PHKBQ93100 1093 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 TRIM47Q96LD4 638 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 AGBL1Q96MI9 1066 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 PIGSQ96S52 555 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 MAP3K14Q99558 947 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 SPZ1Q9BXG8 430 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 SLC26A6Q9BXS9 759 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 AGXT2Q9BYV1 514 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 SLKQ9H2G2 1235 aaPredicted RBP7.39□□□□□ -1.23
VPS4B-205ENST00000591383 RANBP17Q9H2T7 1088 aaKnown RBP7.39□□□□□ -1.23
VPS4B-205ENST00000591383 JMJD4Q9H9V9 463 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 STIM2Q9P246 746 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 RBPJLQ9UBG7 517 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 ZNF214Q9UL59 606 aaPredicted RBP7.39□□□□□ -1.23
VPS4B-205ENST00000591383 TPCN1Q9ULQ1 816 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 TRIM17Q9Y577 477 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 SMCHD1A6NHR9 2005 aa7.39□□□□□ -1.23
VPS4B-205ENST00000591383 CCDC196A0A1B0GTZ2 297 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 ZBTB5O15062 677 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 DTNBO60941 627 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 IGHA2P01877 340 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 PDIA3P30101 505 aaKnown RBP7.38□□□□□ -1.23
VPS4B-205ENST00000591383 STAT3P40763 770 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 OAZ1P54368 228 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 PLCB3Q01970 1234 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 AKAP17AQ02040 695 aaKnown RBP7.38□□□□□ -1.23
VPS4B-205ENST00000591383 KCNC4Q03721 635 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 CPLX2Q6PUV4 134 aaKnown RBP7.38□□□□□ -1.23
VPS4B-205ENST00000591383 NSMFQ6X4W1 530 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 PLEKHH3Q7Z736 793 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 RIOX2Q8IUF8 465 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 CCDC83Q8IWF9 413 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 SRBD1Q8N5C6 995 aaKnown RBP7.38□□□□□ -1.23
VPS4B-205ENST00000591383 SOCS4Q8WXH5 440 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 GTF3C6Q969F1 213 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 COA7Q96BR5 231 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 MMP19Q99542 508 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 LZTS2Q9BRK4 669 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 ACAD9Q9H845 621 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 LRFN2Q9ULH4 789 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 DOCK3Q8IZD9 2030 aa7.38□□□□□ -1.23
VPS4B-205ENST00000591383 MCM3APO60318 1980 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 ZNF536O15090 1300 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 ABCB11O95342 1321 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 PTPDC1A2A3K4 754 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 NFIBO00712 420 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 SIAH2O43255 324 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 CYTH3O43739 400 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 PFKFB2O60825 505 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 PPP1R11O60927 126 aaPredicted RBP7.37□□□□□ -1.23
VPS4B-205ENST00000591383 CDKL5O76039 1030 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 CD2BP2O95400 341 aaKnown RBP7.37□□□□□ -1.23
VPS4B-205ENST00000591383 SLC25A27O95847 323 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 ADH1CP00326 375 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 ADORA2AP29274 412 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 CTGFP29279 349 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 GGCXP38435 758 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 NAPAP54920 295 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 PSMA6P60900 246 aaKnown RBP7.37□□□□□ -1.23
VPS4B-205ENST00000591383 CAP1Q01518 475 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 PRKCZQ05513 592 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 SCRN1Q12765 414 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 KCTD2Q14681 263 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 ARHGEF6Q15052 776 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 ME3Q16798 604 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 MUM1L1Q5H9M0 696 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 SLC30A10Q6XR72 485 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 OTOP1Q7RTM1 612 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 GPR142Q7Z601 462 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 CTU1Q7Z7A3 348 aaKnown RBP7.37□□□□□ -1.23
VPS4B-205ENST00000591383 HSCBQ8IWL3 235 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 TRIM22Q8IYM9 498 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 FBXL16Q8N461 479 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 SHCBP1Q8NEM2 672 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 ZNF274Q96GC6 653 aaPredicted RBP7.37□□□□□ -1.23
VPS4B-205ENST00000591383 DMRTB1Q96MA1 342 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 TRERF1Q96PN7 1200 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 APBA2Q99767 749 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 PRKD2Q9BZL6 878 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 MROH8Q9H579 483 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 RAB6BQ9NRW1 208 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 FBXO40Q9UH90 709 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 ADAMTS5Q9UNA0 930 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 LIMCH1Q9UPQ0 1083 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 RIPK3Q9Y572 518 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 USP3Q9Y6I4 520 aa7.37□□□□□ -1.23
VPS4B-205ENST00000591383 ZNFX1Q9P2E3 1918 aaKnown RBP7.37□□□□□ -1.23
VPS4B-205ENST00000591383 CENPFP49454 3210 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 PFASO15067 1338 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 PNMA6FA0A0J9YX94 578 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 ATP2A1O14983 1001 aa7.36□□□□□ -1.23
VPS4B-205ENST00000591383 ZBTB39O15060 712 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms