RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 EFCAB14O75071 495 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 ARIH2O95376 493 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 CXCL10P02778 98 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 ALADP13716 330 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 KCNA5P22460 613 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 SSTR3P32745 418 aaPredicted RBP12.66□□□□□ -0.38
GFAP-217ENST00000590922 GNAQP50148 359 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 FGD1P98174 961 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 RBL2Q08999 1139 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 APOBRQ0VD83 1088 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 SYNE3Q6ZMZ3 975 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 CCDC82Q8N4S0 544 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 SYTL5Q8TDW5 730 aaPredicted RBP12.66□□□□□ -0.38
GFAP-217ENST00000590922 AFG1LQ8WV93 481 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 DHX38Q92620 1227 aaKnown RBP12.66□□□□□ -0.38
GFAP-217ENST00000590922 BRF1Q92994 677 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 LZTS2Q9BRK4 669 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 SPZ1Q9BXG8 430 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 COL20A1Q9P218 1284 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 NAP1L2Q9ULW6 460 aaPredicted RBP12.66□□□□□ -0.38
GFAP-217ENST00000590922 KIAA1217Q5T5P2 1943 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 hCG_1642624A0A1W2PR95 340 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 ZBTB43O43298 467 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 NBNO60934 754 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 SEC24BO95487 1268 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 CFBP00751 764 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 MMP3P08254 477 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 CKBP12277 381 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 PSMA5P28066 241 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 SMARCA1P28370 1054 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 IKBKEQ14164 716 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 CCDC62Q6P9F0 684 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 TMTC3Q6ZXV5 915 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 MCF2L2Q86YR7 1114 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.65□□□□□ -0.38
GFAP-217ENST00000590922 KAT2BQ92831 832 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 RRP36Q96EU6 259 aaKnown RBP12.65□□□□□ -0.38
GFAP-217ENST00000590922 ZSWIM6Q9HCJ5 1215 aa12.65□□□□□ -0.38
GFAP-217ENST00000590922 GH1P01241 217 aa12.64□□□□□ -0.39
GFAP-217ENST00000590922 CDC27P30260 824 aa12.64□□□□□ -0.39
GFAP-217ENST00000590922 RTN1Q16799 776 aa12.64□□□□□ -0.39
GFAP-217ENST00000590922 LY6KQ17RY6 165 aa12.64□□□□□ -0.39
GFAP-217ENST00000590922 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
GFAP-217ENST00000590922 TCTN1Q2MV58 587 aa12.64□□□□□ -0.39
GFAP-217ENST00000590922 PUS10Q3MIT2 529 aaKnown RBP12.64□□□□□ -0.39
GFAP-217ENST00000590922 PTCRAQ6ISU1 281 aaPredicted RBP12.64□□□□□ -0.39
GFAP-217ENST00000590922 RUFY3Q7L099 469 aa12.64□□□□□ -0.39
GFAP-217ENST00000590922 FBXO22Q8NEZ5 403 aa12.64□□□□□ -0.39
GFAP-217ENST00000590922 UIMC1Q96RL1 719 aa12.64□□□□□ -0.39
GFAP-217ENST00000590922 UPF3BQ9BZI7 483 aaKnown RBP12.64□□□□□ -0.39
GFAP-217ENST00000590922 FAM217BQ9NTX9 383 aaPredicted RBP12.64□□□□□ -0.39
GFAP-217ENST00000590922 GTF2IRD1Q9UHL9 959 aa12.64□□□□□ -0.39
GFAP-217ENST00000590922 INSL6Q9Y581 213 aa12.64□□□□□ -0.39
GFAP-217ENST00000590922 MICAL3Q7RTP6 2002 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 GRXCR2A6NFK2 248 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 GOLGA8AA7E2F4 631 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 GOLGA8BA8MQT2 603 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 IL9P15248 144 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 HOXA13P31271 388 aaPredicted RBP12.63□□□□□ -0.39
GFAP-217ENST00000590922 HSD17B4P51659 736 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 PTK7Q13308 1070 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 DGKDQ16760 1214 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 FAM117BQ6P1L5 589 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 SEPT14Q6ZU15 432 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 C7orf31Q8N865 590 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 RMDN3Q96TC7 470 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 KATNAL1Q9BW62 490 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 AGXT2Q9BYV1 514 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 MAF1Q9H063 256 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 RBM28Q9NW13 759 aaKnown RBP12.63□□□□□ -0.39
GFAP-217ENST00000590922 HDAC6Q9UBN7 1215 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 SEC63Q9UGP8 760 aaKnown RBP12.63□□□□□ -0.39
GFAP-217ENST00000590922 CYP46A1Q9Y6A2 500 aa12.63□□□□□ -0.39
GFAP-217ENST00000590922 CNTNAP5Q8WYK1 1306 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 MYH7BA7E2Y1 1941 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 GCOM1H8Y6P7 765 aaPredicted RBP12.62□□□□□ -0.39
GFAP-217ENST00000590922 POLR2MP0CAP2 368 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 ADD1P35611 737 aaKnown RBP12.62□□□□□ -0.39
GFAP-217ENST00000590922 MRE11P49959 708 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 GHRHRQ02643 423 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 FUT2Q10981 343 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 TRAF1Q13077 416 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 TOB2Q14106 344 aaPredicted RBP12.62□□□□□ -0.39
GFAP-217ENST00000590922 PTPROQ16827 1216 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 FBXL16Q8N461 479 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 NSUN6Q8TEA1 469 aaKnown RBP12.62□□□□□ -0.39
GFAP-217ENST00000590922 MRPL38Q96DV4 380 aaKnown RBP12.62□□□□□ -0.39
GFAP-217ENST00000590922 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
GFAP-217ENST00000590922 C17orf80Q9BSJ5 609 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 ALG1Q9BT22 464 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 TM6SF1Q9BZW5 370 aa12.62□□□□□ -0.39
GFAP-217ENST00000590922 DCXO43602 365 aa12.61□□□□□ -0.39
GFAP-217ENST00000590922 LGR5O75473 907 aa12.61□□□□□ -0.39
GFAP-217ENST00000590922 AMHP03971 560 aa12.61□□□□□ -0.39
GFAP-217ENST00000590922 EIF2AK2P19525 551 aaKnown RBP12.61□□□□□ -0.39
GFAP-217ENST00000590922 PSEN2P49810 448 aa12.61□□□□□ -0.39
GFAP-217ENST00000590922 METAP2P50579 478 aaKnown RBP eCLIP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms