RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, human

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCDH-213	ENST00000590627	PGBD1	Q96JS3	809 aa		18.84	■□□□□ 0.61
GCDH-213	ENST00000590627	TAAR1	Q96RJ0	339 aa		18.84	■□□□□ 0.61
GCDH-213	ENST00000590627	RMDN3	Q96TC7	470 aa		18.84	■□□□□ 0.61
GCDH-213	ENST00000590627	EYS	Q5T1H1	3165 aa		18.84	■□□□□ 0.61
GCDH-213	ENST00000590627	ARHGAP4	P98171	946 aa		18.83	■□□□□ 0.6
GCDH-213	ENST00000590627	DNM1	Q05193	864 aa	Known RBP	18.83	■□□□□ 0.6
GCDH-213	ENST00000590627	ORC2	Q13416	577 aa	Predicted RBP	18.83	■□□□□ 0.6
GCDH-213	ENST00000590627	GNAS	Q5JWF2	1037 aa		18.83	■□□□□ 0.6
GCDH-213	ENST00000590627	MFSD5	Q6N075	450 aa		18.83	■□□□□ 0.6
GCDH-213	ENST00000590627	MOXD1	Q6UVY6	613 aa		18.83	■□□□□ 0.6
GCDH-213	ENST00000590627	NSUN6	Q8TEA1	469 aa	Known RBP	18.83	■□□□□ 0.6
GCDH-213	ENST00000590627	NAP1L4	Q99733	375 aa	Known RBP	18.83	■□□□□ 0.6
GCDH-213	ENST00000590627	PXMP2	Q9NR77	195 aa		18.83	■□□□□ 0.6
GCDH-213	ENST00000590627	CYP3A7-CYP3A51P	A0A087WV96	503 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	LOC102724159	A0A0B4J2E5	919 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627		A0A0U1RQG5	324 aa	Predicted RBP	18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	ASB14	A6NK59	587 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	ARVCF	O00192	962 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	CYP3A7	P24462	503 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	CIITA	P33076	1130 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	IRX5	P78411	483 aa	Predicted RBP	18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	CNTN2	Q02246	1040 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	PWP2	Q15269	919 aa	Known RBP	18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	TTC38	Q5R3I4	469 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	PPP4R3A	Q6IN85	833 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	XRRA1	Q6P2D8	792 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	VTI1A	Q96AJ9	217 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	IWS1	Q96ST2	819 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	PDCD2L	Q9BRP1	358 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	POLR3E	Q9NVU0	708 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	RTEL1	Q9NZ71	1219 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	ADD3	Q9UEY8	706 aa	Known RBP	18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	CFAP45	Q9UL16	551 aa		18.82	■□□□□ 0.6
GCDH-213	ENST00000590627	SOWAHB	A6NEL2	793 aa		18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	CTAGE5	O15320	804 aa		18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	GCFC2	P16383	781 aa	Known RBP	18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	NASP	P49321	788 aa	Predicted RBP	18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	KRT85	P78386	507 aa		18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	TNFAIP2	Q03169	654 aa		18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	PPIG	Q13427	754 aa	Known RBP eCLIP	18.81	■□□□□ 0.6	7e-7	■■■□□ 16.1
GCDH-213	ENST00000590627	ARHGEF16	Q5VV41	709 aa		18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	PCNX4	Q63HM2	1172 aa		18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	MAFA	Q8NHW3	353 aa	Predicted RBP	18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	MYLIP	Q8WY64	445 aa		18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	MBOAT7	Q96N66	472 aa		18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	PURB	Q96QR8	312 aa	Known RBP	18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	USP28	Q96RU2	1077 aa		18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	COL25A1	Q9BXS0	654 aa	Predicted RBP	18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	MORC2	Q9Y6X9	1032 aa	Predicted RBP	18.81	■□□□□ 0.6
GCDH-213	ENST00000590627	ASTN1	O14525	1302 aa		18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	WNT7A	O00755	349 aa		18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	TLR3	O15455	904 aa	Known RBP	18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	BAG4	O95429	457 aa	Known RBP	18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	BMP15	O95972	392 aa		18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	PGM5	Q15124	567 aa		18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	LETM2	Q2VYF4	491 aa		18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	VSIG10L	Q86VR7	867 aa		18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	FAM126B	Q8IXS8	530 aa		18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	18.8	■□□□□ 0.6	9e-7	■□□□□ 10.7
GCDH-213	ENST00000590627	PCDHB6	Q9Y5E3	794 aa		18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	VCAN	P13611	3396 aa		18.8	■□□□□ 0.6
GCDH-213	ENST00000590627	CABYR	O75952	493 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	YEATS4	O95619	227 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	NR3C2	P08235	984 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	FOSL2	P15408	326 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	EIF2AK2	P19525	551 aa	Known RBP	18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	ATP2B1	P20020	1258 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	EDNRB	P24530	442 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	DNAJB2	P25686	324 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	ALDH5A1	P51649	535 aa	Predicted RBP	18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	TMEM199	Q8N511	208 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	MORC4	Q8TE76	937 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	CHAMP1	Q96JM3	812 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	SEZ6L	Q9BYH1	1024 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	TFIP11	Q9UBB9	837 aa	Known RBP	18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	RCOR1	Q9UKL0	485 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	CEP131	Q9UPN4	1083 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	GNE	Q9Y223	722 aa	Known RBP	18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	CLIC4	Q9Y696	253 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	LRRC37A2	A6NM11	1700 aa		18.79	■□□□□ 0.6
GCDH-213	ENST00000590627	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.78	■□□□□ 0.6
GCDH-213	ENST00000590627		B4DLN1	442 aa		18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	CCNT1	O60563	726 aa	Known RBP	18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	STAM2	O75886	525 aa		18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	CCND2	P30279	289 aa		18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	NBR1	Q14596	966 aa		18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	SLC39A14	Q15043	492 aa		18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	PTPA	Q15257	358 aa		18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	SF3A1	Q15459	793 aa	Known RBP	18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	ZNF174	Q15697	407 aa		18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	NIPA1	Q7RTP0	329 aa		18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	TLK2	Q86UE8	772 aa		18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	SLC43A3	Q8NBI5	491 aa		18.78	■□□□□ 0.6
GCDH-213	ENST00000590627	IL31RA	Q8NI17	732 aa		18.78	■□□□□ 0.6

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