RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 KRT40Q6A162 431 aa24.53■■□□□ 1.52
R3HDM4-206ENST00000590454 TAPT1Q6NXT6 567 aa24.53■■□□□ 1.52
R3HDM4-206ENST00000590454 REXO1Q8N1G1 1221 aaKnown RBP24.53■■□□□ 1.52
R3HDM4-206ENST00000590454 IWS1Q96ST2 819 aa24.53■■□□□ 1.52
R3HDM4-206ENST00000590454 ANO3Q9BYT9 981 aa24.53■■□□□ 1.52
R3HDM4-206ENST00000590454 TSPYL2Q9H2G4 693 aaPredicted RBP24.53■■□□□ 1.52
R3HDM4-206ENST00000590454 NKX2-4Q9H2Z4 354 aa24.53■■□□□ 1.52
R3HDM4-206ENST00000590454 LOC102724159A0A0B4J2E5 919 aa24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 SPDYE3A6NKU9 549 aa24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 NKX3-2P78367 333 aa24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 MRPS9P82933 396 aaKnown RBP24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 PWP2Q15269 919 aaKnown RBP24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 VSIG10LQ86VR7 867 aa24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 HSCBQ8IWL3 235 aa24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 BLIDQ8IZY5 108 aa24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 DAGLBQ8NCG7 672 aa24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 GLT8D2Q9H1C3 349 aa24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 CXXC1Q9P0U4 656 aaPredicted RBP24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 MUC3AQ02505 3323 aa24.52■■□□□ 1.52
R3HDM4-206ENST00000590454 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.51■■□□□ 1.51
R3HDM4-206ENST00000590454 FAM184AQ8NB25 1140 aa24.51■■□□□ 1.51
R3HDM4-206ENST00000590454 BICD2Q8TD16 824 aa24.51■■□□□ 1.51
R3HDM4-206ENST00000590454 SMC3Q9UQE7 1217 aa24.51■■□□□ 1.51
R3HDM4-206ENST00000590454 CTAGE5O15320 804 aa24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 RGS20O76081 388 aa24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 XBP1P17861 261 aa24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 PLA2G5P39877 138 aa24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 AP3B2Q13367 1082 aa24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 STXBP2Q15833 593 aa24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 C8orf76Q96K31 380 aa24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 HIPK3Q9H422 1215 aa24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 VTA1Q9NP79 307 aa24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 RTEL1Q9NZ71 1219 aa24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 YBX2Q9Y2T7 364 aaKnown RBP24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.5■■□□□ 1.51
R3HDM4-206ENST00000590454 EDIL3O43854 480 aa24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 CABYRO75952 493 aa24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 FOSP01100 380 aaPredicted RBP24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 MMP1P03956 469 aa24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 CCND2P30279 289 aa24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 NR5A1Q13285 461 aa24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 PCNX4Q63HM2 1172 aa24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 SEPT14Q6ZU15 432 aa24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 OTOP2Q7RTS6 562 aa24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 TEX2Q8IWB9 1127 aa24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 FAM177A1Q8N128 213 aaPredicted RBP24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 SLC43A3Q8NBI5 491 aa24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 FAM122AQ96E09 287 aa24.49■■□□□ 1.51
R3HDM4-206ENST00000590454 FAM205CA6NFA0 338 aa24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 MYH7BA7E2Y1 1941 aa24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 B4DLN1 442 aa24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 ARIH2O95376 493 aa24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 SREBF1P36956 1147 aa24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 BEX3Q00994 111 aa24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 TNFAIP2Q03169 654 aa24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 EARS2Q5JPH6 523 aaKnown RBP24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 KIAA1217Q5T5P2 1943 aa24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 GALNT17Q6IS24 598 aa24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 CRYGNQ8WXF5 182 aa24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 MPHOSPH6Q99547 160 aaKnown RBP24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 SEZ6LQ9BYH1 1024 aa24.48■■□□□ 1.51
R3HDM4-206ENST00000590454 BTBD18B2RXH4 712 aa24.47■■□□□ 1.51
R3HDM4-206ENST00000590454 EIF3JO75822 258 aaKnown RBP24.47■■□□□ 1.51
R3HDM4-206ENST00000590454 TRIM29Q14134 588 aa24.47■■□□□ 1.51
R3HDM4-206ENST00000590454 CXCL17Q6UXB2 119 aa24.47■■□□□ 1.51
R3HDM4-206ENST00000590454 FBXO18Q8NFZ0 1043 aa24.47■■□□□ 1.51
R3HDM4-206ENST00000590454 TNFRSF25Q93038 417 aa24.47■■□□□ 1.51
R3HDM4-206ENST00000590454 RBM47A0AV96 593 aaKnown RBP24.46■■□□□ 1.51
R3HDM4-206ENST00000590454 SMPD1P17405 629 aa24.46■■□□□ 1.51
R3HDM4-206ENST00000590454 KRT2P35908 639 aa24.46■■□□□ 1.51
R3HDM4-206ENST00000590454 ARHGAP4P98171 946 aa24.46■■□□□ 1.51
R3HDM4-206ENST00000590454 ITGA7Q13683 1181 aa24.46■■□□□ 1.51
R3HDM4-206ENST00000590454 DIS3L2Q8IYB7 885 aaKnown RBP24.46■■□□□ 1.51
R3HDM4-206ENST00000590454 RPUSD2Q8IZ73 545 aaKnown RBP24.46■■□□□ 1.51
R3HDM4-206ENST00000590454 CYP2W1Q8TAV3 490 aa24.46■■□□□ 1.51
R3HDM4-206ENST00000590454 INTS4Q96HW7 963 aaKnown RBP24.46■■□□□ 1.51
R3HDM4-206ENST00000590454 C1QTNF1Q9BXJ1 281 aa24.46■■□□□ 1.51
R3HDM4-206ENST00000590454 UMODL1Q5DID0 1318 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 ZEB2O60315 1214 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 ITGB5P18084 799 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 CCL23P55773 120 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 SEMA3FQ13275 785 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 AAK1Q2M2I8 961 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 PPP2R2DQ66LE6 453 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 SPRYD3Q8NCJ5 442 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 COPS5Q92905 334 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 WDR11Q9BZH6 1224 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 EHMT1Q9H9B1 1298 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 SLC4A7Q9Y6M7 1214 aa24.45■■□□□ 1.5
R3HDM4-206ENST00000590454 BMP1P13497 986 aa24.44■■□□□ 1.5
R3HDM4-206ENST00000590454 RABGGTBP53611 331 aa24.44■■□□□ 1.5
R3HDM4-206ENST00000590454 CCDC62Q6P9F0 684 aa24.44■■□□□ 1.5
R3HDM4-206ENST00000590454 TLK2Q86UE8 772 aa24.44■■□□□ 1.5
R3HDM4-206ENST00000590454 MICALL1Q8N3F8 863 aa24.44■■□□□ 1.5
R3HDM4-206ENST00000590454 TBCKQ8TEA7 893 aa24.44■■□□□ 1.5
R3HDM4-206ENST00000590454 INPP4AQ96PE3 977 aaPredicted RBP24.44■■□□□ 1.5
R3HDM4-206ENST00000590454 NOC4LQ9BVI4 516 aaKnown RBP24.44■■□□□ 1.5
R3HDM4-206ENST00000590454 AP5M1Q9H0R1 490 aa24.44■■□□□ 1.5
R3HDM4-206ENST00000590454 GNEQ9Y223 722 aaKnown RBP24.44■■□□□ 1.5
R3HDM4-206ENST00000590454 PCDHA11Q9Y5I1 949 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms