RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TTYH3Q9C0H2 523 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 PLCB1Q9NQ66 1216 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 SAMD15Q9P1V8 674 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 CACNA1FO60840 1977 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 COL5A2P05997 1499 aaPredicted RBP16.62■□□□□ 0.25
CIRBP-228ENST00000590347 LRRD1A4D1F6 860 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 A6NHS1 94 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 SRGNP10124 158 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 RARAP10276 462 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 WHAMMQ8TF30 809 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 NOX5Q96PH1 765 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 PSMD1Q99460 953 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 PCMTD2Q9NV79 361 aa16.62■□□□□ 0.25
CIRBP-228ENST00000590347 C5orf60A6NFR6 353 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 DNM2P50570 870 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 TMEM62Q0P6H9 643 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 ADAM9Q13443 819 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 IL17AQ16552 155 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 NUGGCQ68CJ6 796 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 ZNF579Q8NAF0 562 aaKnown RBP16.61■□□□□ 0.25
CIRBP-228ENST00000590347 TRIM51Q9BSJ1 452 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 DDX23Q9BUQ8 820 aaKnown RBP16.61■□□□□ 0.25
CIRBP-228ENST00000590347 KLRC1P26715 233 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 SOGA3Q5TF21 947 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 PIK3AP1Q6ZUJ8 805 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 SPATA21Q7Z572 469 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 KLHL23Q8NBE8 558 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 TBC1D5Q92609 795 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 PDS5AQ29RF7 1337 aaKnown RBP16.61■□□□□ 0.25
CIRBP-228ENST00000590347 H7C1D1 291 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 FCER1AP12319 257 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 VEGFAP15692 232 aaPredicted RBP16.61■□□□□ 0.25
CIRBP-228ENST00000590347 STAT6P42226 847 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 RAD23BP54727 409 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 PDCD2Q16342 344 aaPredicted RBP16.61■□□□□ 0.25
CIRBP-228ENST00000590347 APPBP2Q92624 585 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 FGFR1OP2Q9NVK5 253 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 LNPEPQ9UIQ6 1025 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 TBC1D2BQ9UPU7 963 aa16.61■□□□□ 0.25
CIRBP-228ENST00000590347 V9GY48 417 aaPredicted RBP16.61■□□□□ 0.25
CIRBP-228ENST00000590347 PHRF1Q9P1Y6 1649 aaKnown RBP16.6■□□□□ 0.25
CIRBP-228ENST00000590347 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
CIRBP-228ENST00000590347 FOXP1Q9H334 677 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-228ENST00000590347 RGL1Q9NZL6 768 aa16.6■□□□□ 0.25
CIRBP-228ENST00000590347 SMAPO00193 183 aa16.6■□□□□ 0.25
CIRBP-228ENST00000590347 SART1O43290 800 aaKnown RBP16.6■□□□□ 0.25
CIRBP-228ENST00000590347 PRKAB2O43741 272 aa16.6■□□□□ 0.25
CIRBP-228ENST00000590347 FERP16591 822 aa16.6■□□□□ 0.25
CIRBP-228ENST00000590347 ROR2Q01974 943 aaKnown RBP16.6■□□□□ 0.25
CIRBP-228ENST00000590347 ANKRD40Q6AI12 368 aa16.6■□□□□ 0.25
CIRBP-228ENST00000590347 PDXDC2PQ6P474 469 aa16.6■□□□□ 0.25
CIRBP-228ENST00000590347 CRELD2Q6UXH1 353 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-228ENST00000590347 ARHGAP22Q7Z5H3 698 aa16.6■□□□□ 0.25
CIRBP-228ENST00000590347 KIAA0825Q8IV33 1275 aa16.6■□□□□ 0.25
CIRBP-228ENST00000590347 ELOA2Q8IYF1 753 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-228ENST00000590347 FAM129AQ9BZQ8 928 aa16.6■□□□□ 0.25
CIRBP-228ENST00000590347 AZI2Q9H6S1 392 aa16.6■□□□□ 0.25
CIRBP-228ENST00000590347 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-228ENST00000590347 STXBP3O00186 592 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 TTI1O43156 1089 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 MSH2P43246 934 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 ZNF268Q14587 947 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-228ENST00000590347 ERMARDQ5T6L9 678 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 RUFY4Q6ZNE9 571 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 ADSSL1Q8N142 457 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 FBXL16Q8N461 479 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 RASGRP4Q8TDF6 673 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 SRCAPQ6ZRS2 3230 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 GHRP10912 638 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 IFNAR1P17181 557 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 KCNQ4P56696 695 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 TTC38Q5R3I4 469 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 TMEM237Q96Q45 408 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 DUSP9Q99956 384 aaKnown RBP16.59■□□□□ 0.25
CIRBP-228ENST00000590347 BSDC1Q9NW68 430 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-228ENST00000590347 ERVV-2B6SEH9 535 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 GTPBP6O43824 516 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-228ENST00000590347 EMC10Q5UCC4 262 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 CRACR2BQ8N4Y2 399 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-228ENST00000590347 MREGQ8N565 214 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 DYDC1Q8WWB3 177 aa16.59■□□□□ 0.25
CIRBP-228ENST00000590347 ZNF317Q96PQ6 595 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-228ENST00000590347 INTS9Q9NV88 658 aaKnown RBP16.59■□□□□ 0.25
CIRBP-228ENST00000590347 C5P01031 1676 aa16.58■□□□□ 0.25
CIRBP-228ENST00000590347 FAM163BP0C2L3 166 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 CCND1P24385 295 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 CACNA2D4Q7Z3S7 1137 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 GDAP1Q8TB36 358 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 GORASP1Q9BQQ3 440 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 KCNMB3Q9NPA1 279 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 CEP126Q9P2H0 1117 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 COL18A1P39060 1754 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 MFN1Q8IWA4 741 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 ANKRD42Q8N9B4 389 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 CNKSR1Q969H4 720 aa16.58■□□□□ 0.24
CIRBP-228ENST00000590347 DBR1Q9UK59 544 aaKnown RBP16.58■□□□□ 0.24
CIRBP-228ENST00000590347 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.24
CIRBP-228ENST00000590347 A0A1W2PQC6 194 aa16.57■□□□□ 0.24
CIRBP-228ENST00000590347 CREB1P16220 341 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms