RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 LRRC15Q8TF66 581 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 STAMQ92783 540 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 HAS1Q92839 578 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 PLIN2Q99541 437 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 EHMT1Q9H9B1 1298 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 DISC1Q9NRI5 854 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 RNF146Q9NTX7 359 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 COL20A1Q9P218 1284 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 TUBE1Q9UJT0 475 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 PCDHA5Q9Y5H7 936 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 ZNF236Q9UL36 1845 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 RPTORQ8N122 1335 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 ATP2A1O14983 1001 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 MARCH6O60337 910 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 PGK2P07205 417 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 SLFN14P0C7P3 912 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 PLCG1P19174 1290 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 UBA7P41226 1012 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 STAT6P42226 847 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 HSD17B4P51659 736 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 USP11P51784 963 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 ZNF792Q3KQV3 632 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 PRR16Q569H4 304 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 PRAMEF19Q5SWL8 479 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 SNRNP48Q6IEG0 339 aaKnown RBP11.46□□□□□ -0.57
APOC1-205ENST00000589781 SH3RF1Q7Z6J0 888 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 NCAPG2Q86XI2 1143 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 ELOA2Q8IYF1 753 aaPredicted RBP11.46□□□□□ -0.57
APOC1-205ENST00000589781 IGSF22Q8N9C0 903 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 LENG9Q96B70 501 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 PAGE5Q96GU1 130 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 AK8Q96MA6 479 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 MMTAG2Q9BU76 263 aaKnown RBP11.46□□□□□ -0.57
APOC1-205ENST00000589781 CCSER1Q9C0I3 900 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 MROH8Q9H579 483 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 KCNMB3Q9NPA1 279 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 PCDH10Q9P2E7 1040 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 USP25Q9UHP3 1055 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 HOOK1Q9UJC3 728 aaKnown RBP11.46□□□□□ -0.57
APOC1-205ENST00000589781 MAN1B1Q9UKM7 699 aa11.46□□□□□ -0.57
APOC1-205ENST00000589781 LRRC37A2A6NM11 1700 aa11.46□□□□□ -0.58
APOC1-205ENST00000589781 DNAJC25-GNG10A0A024R161 153 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 CYP3A7-CYP3A51PA0A087WV96 503 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 FAM86B1E9PN63 330 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 STRNO43815 780 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 CYP3A4P08684 503 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 FAM86B2P0C5J1 330 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 FDX1P10109 184 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 CYBAP13498 195 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 CYP3A7P24462 503 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 CIITAP33076 1130 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 ZNF76P36508 570 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 ZNF165P49910 485 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 GHRHRQ02643 423 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 UVSSAQ2YD98 709 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 Q4G0T1 1027 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 NAALADL2Q58DX5 795 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 RRAGBQ5VZM2 374 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 KANK3Q6NY19 840 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 NSMFQ6X4W1 530 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 AOPEPQ8N6M6 819 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 IQUBQ8NA54 791 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 IL31RAQ8NI17 732 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 ETNPPLQ8TBG4 499 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 SMARCE1Q969G3 411 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 MAML3Q96JK9 1138 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 ZFP91Q96JP5 570 aaPredicted RBP11.45□□□□□ -0.58
APOC1-205ENST00000589781 PYM1Q9BRP8 204 aaKnown RBP11.45□□□□□ -0.58
APOC1-205ENST00000589781 TTC12Q9H892 705 aaPredicted RBP11.45□□□□□ -0.58
APOC1-205ENST00000589781 LRWD1Q9UFC0 647 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 CCDC39Q9UFE4 941 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 OGDHLQ9ULD0 1010 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 KIAA1217Q5T5P2 1943 aa11.45□□□□□ -0.58
APOC1-205ENST00000589781 ASTN1O14525 1302 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 IGLV3-22A0A075B6J6 115 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 MSH4O15457 936 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 GTPBP6O43824 516 aaPredicted RBP11.44□□□□□ -0.58
APOC1-205ENST00000589781 OAZ1P54368 228 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 DPYDQ12882 1025 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 GRB10Q13322 594 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 IQCB1Q15051 598 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 OLFML2BQ68BL8 750 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.44□□□□□ -0.58
APOC1-205ENST00000589781 MCF2L2Q86YR7 1114 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 TEX2Q8IWB9 1127 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 ABRAQ8N0Z2 381 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 CYP2W1Q8TAV3 490 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 SYTL5Q8TDW5 730 aaPredicted RBP11.44□□□□□ -0.58
APOC1-205ENST00000589781 SNX29Q8TEQ0 813 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 PNMA5Q96PV4 448 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 MTRQ99707 1265 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 TEX13BQ9BXU2 312 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 BLZF1Q9H2G9 400 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 HMX1Q9NP08 348 aaPredicted RBP11.44□□□□□ -0.58
APOC1-205ENST00000589781 PNMA2Q9UL42 364 aa11.44□□□□□ -0.58
APOC1-205ENST00000589781 FRMPD4Q14CM0 1322 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 DOCK5Q9H7D0 1870 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 AP5Z1O43299 807 aa11.43□□□□□ -0.58
APOC1-205ENST00000589781 FARP2O94887 1054 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms