RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SMPD1P17405 629 aa17.15■□□□□ 0.34
ATG4D-211ENST00000589753 CCND3P30281 292 aaPredicted RBP17.15■□□□□ 0.34
ATG4D-211ENST00000589753 TMEM63BQ5T3F8 832 aa17.15■□□□□ 0.34
ATG4D-211ENST00000589753 LRCH2Q5VUJ6 765 aa17.15■□□□□ 0.34
ATG4D-211ENST00000589753 ARL6IP4Q66PJ3 421 aaKnown RBP17.15■□□□□ 0.34
ATG4D-211ENST00000589753 SPATA32Q96LK8 384 aa17.15■□□□□ 0.34
ATG4D-211ENST00000589753 TEKT3Q9BXF9 490 aa17.15■□□□□ 0.34
ATG4D-211ENST00000589753 MORC2Q9Y6X9 1032 aaPredicted RBP17.15■□□□□ 0.34
ATG4D-211ENST00000589753 NFASCO94856 1347 aa17.15■□□□□ 0.34
ATG4D-211ENST00000589753 DHX15O43143 795 aaKnown RBP17.14■□□□□ 0.33
ATG4D-211ENST00000589753 PSMD10O75832 226 aa17.14■□□□□ 0.33
ATG4D-211ENST00000589753 GGPS1O95749 300 aa17.14■□□□□ 0.33
ATG4D-211ENST00000589753 MARCKSP29966 332 aaPredicted RBP17.14■□□□□ 0.33
ATG4D-211ENST00000589753 TMEM266Q2M3C6 531 aa17.14■□□□□ 0.33
ATG4D-211ENST00000589753 CELF3Q5SZQ8 465 aaKnown RBP17.14■□□□□ 0.33
ATG4D-211ENST00000589753 DTHD1Q6ZMT9 781 aa17.14■□□□□ 0.33
ATG4D-211ENST00000589753 CYFIP1Q7L576 1253 aa17.14■□□□□ 0.33
ATG4D-211ENST00000589753 DHX37Q8IY37 1157 aaKnown RBP17.14■□□□□ 0.33
ATG4D-211ENST00000589753 KCNG4Q8TDN1 519 aa17.14■□□□□ 0.33
ATG4D-211ENST00000589753 LEO1Q8WVC0 666 aaPredicted RBP17.14■□□□□ 0.33
ATG4D-211ENST00000589753 COPS5Q92905 334 aa17.14■□□□□ 0.33
ATG4D-211ENST00000589753 TTC12Q9H892 705 aaPredicted RBP17.14■□□□□ 0.33
ATG4D-211ENST00000589753 MLXIPQ9HAP2 919 aa17.14■□□□□ 0.33
ATG4D-211ENST00000589753 HMX1Q9NP08 348 aaPredicted RBP17.14■□□□□ 0.33
ATG4D-211ENST00000589753 RCOR1Q9UKL0 485 aa17.14■□□□□ 0.33
ATG4D-211ENST00000589753 PCDHA12Q9UN75 941 aa17.14■□□□□ 0.33
ATG4D-211ENST00000589753 DDX39AO00148 427 aaKnown RBP17.13■□□□□ 0.33
ATG4D-211ENST00000589753 ADCY6O43306 1168 aa17.13■□□□□ 0.33
ATG4D-211ENST00000589753 SORBS3O60504 671 aa17.13■□□□□ 0.33
ATG4D-211ENST00000589753 PPP6R2O75170 966 aa17.13■□□□□ 0.33
ATG4D-211ENST00000589753 GH1P01241 217 aa17.13■□□□□ 0.33
ATG4D-211ENST00000589753 GJC2Q5T442 439 aaPredicted RBP17.13■□□□□ 0.33
ATG4D-211ENST00000589753 METTL7BQ6UX53 244 aa17.13■□□□□ 0.33
ATG4D-211ENST00000589753 FERMT2Q96AC1 680 aa17.13■□□□□ 0.33
ATG4D-211ENST00000589753 BCAS3Q9H6U6 928 aa17.13■□□□□ 0.33
ATG4D-211ENST00000589753 JPH1Q9HDC5 661 aaPredicted RBP17.13■□□□□ 0.33
ATG4D-211ENST00000589753 SLC9A2Q9UBY0 812 aa17.13■□□□□ 0.33
ATG4D-211ENST00000589753 TCEAL9Q9UHQ7 104 aa17.13■□□□□ 0.33
ATG4D-211ENST00000589753 GNEQ9Y223 722 aaKnown RBP17.13■□□□□ 0.33
ATG4D-211ENST00000589753 VWA3AA6NCI4 1184 aa17.12■□□□□ 0.33
ATG4D-211ENST00000589753 FARP2O94887 1054 aaPredicted RBP17.12■□□□□ 0.33
ATG4D-211ENST00000589753 TECP42680 631 aa17.12■□□□□ 0.33
ATG4D-211ENST00000589753 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATG4D-211ENST00000589753 KRT76Q01546 638 aa17.12■□□□□ 0.33
ATG4D-211ENST00000589753 ARHGAP1Q07960 439 aa17.12■□□□□ 0.33
ATG4D-211ENST00000589753 PPP2R5CQ13362 524 aa17.12■□□□□ 0.33
ATG4D-211ENST00000589753 LAMC2Q13753 1193 aa17.12■□□□□ 0.33
ATG4D-211ENST00000589753 IL17AQ16552 155 aa17.12■□□□□ 0.33
ATG4D-211ENST00000589753 LENG1Q96BZ8 264 aaPredicted RBP17.12■□□□□ 0.33
ATG4D-211ENST00000589753 GDPD2Q9HCC8 539 aa17.12■□□□□ 0.33
ATG4D-211ENST00000589753 DDX20Q9UHI6 824 aaKnown RBP17.12■□□□□ 0.33
ATG4D-211ENST00000589753 FBXO2Q9UK22 296 aaPredicted RBP17.12■□□□□ 0.33
ATG4D-211ENST00000589753 VAV3Q9UKW4 847 aa17.12■□□□□ 0.33
ATG4D-211ENST00000589753 Q9Y3F1 56 aa17.12■□□□□ 0.33
ATG4D-211ENST00000589753 SRPRBQ9Y5M8 271 aaKnown RBP17.12■□□□□ 0.33
ATG4D-211ENST00000589753 CHMP2AO43633 222 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 DUSP11O75319 330 aaKnown RBP17.11■□□□□ 0.33
ATG4D-211ENST00000589753 RARBP10826 455 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 PTGS1P23219 599 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 ME1P48163 572 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 SP4Q02446 784 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 CSPP1Q1MSJ5 1256 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 ZNF746Q6NUN9 644 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-211ENST00000589753 CLEC17AQ6ZS10 378 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 TLK2Q86UE8 772 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 KRI1Q8N9T8 703 aaKnown RBP17.11■□□□□ 0.33
ATG4D-211ENST00000589753 OR6J1Q8NGC5 347 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 EMID1Q96A84 441 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-211ENST00000589753 SPATA33Q96N06 139 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 GBP4Q96PP9 640 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 RAB34Q9BZG1 259 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 UNC45AQ9H3U1 944 aa17.11■□□□□ 0.33
ATG4D-211ENST00000589753 DYNC1LI2O43237 492 aaPredicted RBP17.1■□□□□ 0.33
ATG4D-211ENST00000589753 MSCO60682 206 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 CCNE2O96020 404 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 SPIRE1Q08AE8 756 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 PDIA5Q14554 519 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 NCAPH2Q6IBW4 605 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 B3GNT9Q6UX72 402 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
ATG4D-211ENST00000589753 ARMC5Q96C12 935 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.1■□□□□ 0.33
ATG4D-211ENST00000589753 AP5M1Q9H0R1 490 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 UNC93B1Q9H1C4 597 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 LRWD1Q9UFC0 647 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 PCDHA7Q9UN72 937 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 ELP1O95163 1332 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 DOCK5Q9H7D0 1870 aa17.1■□□□□ 0.33
ATG4D-211ENST00000589753 TCHHQ07283 1943 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 POTEMA6NI47 508 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 WDR64B1ANS9 1081 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 NOP56O00567 594 aaKnown RBP17.09■□□□□ 0.33
ATG4D-211ENST00000589753 CUTAO60888 179 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 MYCP01106 439 aaPredicted RBP17.09■□□□□ 0.33
ATG4D-211ENST00000589753 CCL5P13501 91 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 SFNP31947 248 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 LONP1P36776 959 aaKnown RBP17.09■□□□□ 0.33
ATG4D-211ENST00000589753 JAK3P52333 1124 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 ACTR2P61160 394 aa17.09■□□□□ 0.33
ATG4D-211ENST00000589753 GRIN1Q05586 938 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms