RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 CYTH2Q99418 400 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 PARP3Q9Y6F1 533 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 ERVK-7P63135 1459 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 USP17L12C9JPN9 530 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 USP17L21D6R901 530 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 TNNI1P19237 187 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 CDR2Q01850 454 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 CAV1Q03135 178 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 KRT81Q14533 505 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 CDAN1Q8IWY9 1227 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 RHOT2Q8IXI1 618 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 FAM178BQ8IXR5 827 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 M0R2C6 588 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 SGK1O00141 431 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 LIFRP42702 1097 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 NR5A1Q13285 461 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 LRRC43Q8N309 656 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 SPATA4Q8NEY3 305 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 GPKOWQ92917 476 aaPredicted RBP eCLIP15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 ZNF653Q96CK0 615 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 HDAC6Q9UBN7 1215 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 CPSF1Q10570 1443 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 MIF4GDA9UHW6 222 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 ATP1A1P05023 1023 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 RBM26Q5T8P6 1007 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 SLITRK6Q9H5Y7 841 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 TRPC6Q9Y210 931 aa15.8■□□□□ 0.12
SMARCA4-214ENST00000589677 IQANK1A0A1B0GTG1 560 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 HAUS5O94927 633 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 KAZNQ674X7 775 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 MRPL46Q9H2W6 279 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 ANLNQ9NQW6 1124 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 CEP72Q9P209 647 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 FHOD1Q9Y613 1164 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 PLEKHG3A1L390 1219 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 ENO4A6NNW6 628 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 PRPF3O43395 683 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 ACSL3O95573 720 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 POLR2BP30876 1174 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 SLC1A4P43007 532 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 MDM2Q00987 491 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 KLC1Q07866 573 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 CABLES1Q8TDN4 633 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 REREQ9P2R6 1566 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 RPAP1Q9BWH6 1393 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 A0A1W2PQC6 194 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 DIAPH2O60879 1101 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 HNRNPCP07910 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 PDE1BQ01064 536 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 PREX2Q70Z35 1606 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 SYNGAP1Q96PV0 1343 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 PTK2Q05397 1052 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 CCDC138Q96M89 665 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 ADAMTS1Q9UHI8 967 aa15.79■□□□□ 0.12
SMARCA4-214ENST00000589677 PLS3P13797 630 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 NFRKBQ6P4R8 1299 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 EPM2AIP1Q7L775 607 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 RASGRP2Q7LDG7 609 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 SCYL1Q96KG9 808 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 NDE1Q9NXR1 346 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 SNX24Q9Y343 169 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 LMTK3Q96Q04 1460 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 FAM187AA6NFU0 413 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 KLRF2D3W0D1 207 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 SH3BP5O60239 455 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 GAP43P17677 238 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 BSPRYQ5W0U4 402 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 MRPS35P82673 323 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 SEMA3FQ13275 785 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 JADE1Q6IE81 842 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 CENPUQ71F23 418 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 CCDC125Q86Z20 511 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 FAM81BQ96LP2 452 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 MLXIPQ9HAP2 919 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 SLC40A1Q9NP59 571 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 PPP1R12AO14974 1030 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 EIF6P56537 245 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 BYSLQ13895 437 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 RINT1Q6NUQ1 792 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 MAML1Q92585 1016 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 TGS1Q96RS0 853 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 FAM96AQ9H5X1 160 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 PSTPIP2Q9H939 334 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 PAIP2BQ9ULR5 123 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 ARL2BPQ9Y2Y0 163 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 MAD1L1Q9Y6D9 718 aa15.78■□□□□ 0.12
SMARCA4-214ENST00000589677 TTC37Q6PGP7 1564 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 GFPT2O94808 682 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 LSP1P33241 339 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 DDIT3P35638 169 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 RSBN1LQ6PCB5 846 aaPredicted RBP15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 C16orf87Q6PH81 154 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 A0A0G2JND7 137 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 FAM170AA1A519 330 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 RASA4BC9J798 803 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 RASA4O43374 803 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 FAM47EQ6ZV65 393 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 ANO5Q75V66 913 aa15.77■□□□□ 0.12
SMARCA4-214ENST00000589677 FAM186BQ8IYM0 893 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms